RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 EIF4E1BA6NMX2 242 aaKnown RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 ZNF217O75362 1048 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 TNNI1P19237 187 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 TNNC1P63316 161 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 HNRNPDQ14103 355 aaKnown RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 CCDC157Q569K6 752 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 KRBA2Q6ZNG9 492 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 NUDT18Q6ZVK8 323 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 TRAPPC11Q7Z392 1133 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 CACUL1Q86Y37 369 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 ZCCHC9Q8N567 271 aaKnown RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 SYAP1Q96A49 352 aaPredicted RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 CEP295NLQ96MC4 621 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 BBS2Q9BXC9 721 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 IGSF10Q6WRI0 2623 aa14.6□□□□□ -0.07
DDX39A-201ENST00000242776 GOLGA4Q13439 2230 aaKnown RBP14.6□□□□□ -0.07
DDX39A-201ENST00000242776 PRRT4C9JH25 899 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 GJB3O75712 270 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 RTN3O95197 1032 aaPredicted RBP14.59□□□□□ -0.07
DDX39A-201ENST00000242776 GNSP15586 552 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 PGFP49763 221 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 KLHL40Q2TBA0 621 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
DDX39A-201ENST00000242776 B3GALNT2Q8NCR0 500 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 CCDC127Q96BQ5 260 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 CRELD1Q96HD1 420 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 MRGPRX1Q96LB2 322 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 PRDM16Q9HAZ2 1276 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 HSPBP1Q9NZL4 362 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 APOBEC2Q9Y235 224 aaKnown RBP14.59□□□□□ -0.07
DDX39A-201ENST00000242776 APC2O95996 2303 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 TMEM131Q92545 1883 aa14.59□□□□□ -0.07
DDX39A-201ENST00000242776 TBX18O95935 607 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 MYL1P05976 194 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 TYRP14679 529 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 SLC5A3P53794 718 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 CDH8P55286 799 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 ORC1Q13415 861 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 SCARA5Q6ZMJ2 495 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 WDR49Q8IV35 697 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 KIAA1958Q8N8K9 716 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 PDZD8Q8NEN9 1154 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 OTUB2Q96DC9 234 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 ZNF419Q96HQ0 510 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-201ENST00000242776 GPR174Q9BXC1 333 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 FAM124BQ9H5Z6 455 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-201ENST00000242776 OLFML3Q9NRN5 406 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 KBTBD4Q9NVX7 518 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 PLK2Q9NYY3 685 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 SHROOM3Q8TF72 1996 aa14.58□□□□□ -0.08
DDX39A-201ENST00000242776 SMG1Q96Q15 3661 aaKnown RBP14.58□□□□□ -0.08
DDX39A-201ENST00000242776 CLIC2O15247 247 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 CYP2J2P51589 502 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 MYL6P60660 151 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 SLC14A1Q13336 389 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 SURF1Q15526 300 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 WDR45BQ5MNZ6 344 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 FAM35AQ86V20 835 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 ELOA2Q8IYF1 753 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 KCNV2Q8TDN2 545 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 JAKMIP2Q96AA8 810 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 TOE1Q96GM8 510 aaKnown RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 XPO6Q96QU8 1125 aaKnown RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 NUP62CLQ9H1M0 184 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 GAREM1Q9H706 876 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 CD248Q9HCU0 757 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 SUSD2Q9UGT4 822 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 NUDT5Q9UKK9 219 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 PCOLCE2Q9UKZ9 415 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 URB1O60287 2271 aaKnown RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 FAM149AA5PLN7 773 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 MDM4O15151 490 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 TLR5O60602 858 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 TACC1O75410 805 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 ATXN1LP0C7T5 689 aaKnown RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 NCAM1P13591 858 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 CD6P30203 668 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 AFMP43652 599 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 CYP4F3Q08477 520 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 TRPC3Q13507 836 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 ALCAMQ13740 583 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 FOXJ1Q92949 421 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 KRT82Q9NSB4 513 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 FNDC3AQ9Y2H6 1198 aaKnown RBP14.57□□□□□ -0.08
DDX39A-201ENST00000242776 STARD13Q9Y3M8 1113 aa14.57□□□□□ -0.08
DDX39A-201ENST00000242776 A0A1B0GTW7 788 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 PHACTR2O75167 634 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 AP1G2O75843 785 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 PRB1P04280 392 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 CCDC130P13994 396 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 DGKGP49619 791 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 SNRNP35Q16560 246 aaKnown RBP14.56□□□□□ -0.08
DDX39A-201ENST00000242776 FUT11Q495W5 492 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms