RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NUDT19A8MXV4 375 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 E7ENQ6 273 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ITGA2BP08514 1039 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SPATA31D3P0C874 917 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 HOXD13P35453 343 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ANKRD20A4Q4UJ75 823 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ANKRD20A1Q5TYW2 823 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 C8orf74Q6P047 294 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 LRRC8BQ6P9F7 803 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 TTC23LQ6PF05 361 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SPATA31D4Q6ZUB0 917 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 GALNTL5Q7Z4T8 443 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SPATA24Q86W54 205 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 UNC45BQ8IWX7 931 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ZNF668Q96K58 619 aaPredicted RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 TBC1D10AQ9BXI6 508 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 MRPL1Q9BYD6 325 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 LMAN2LQ9H0V9 348 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 EPS8L2Q9H6S3 715 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 CNOT7Q9UIV1 285 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 DNM3Q9UQ16 869 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ROBO1Q9Y6N7 1651 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ATP6V1G2-DDX39BF2Z307 99 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FARP2O94887 1054 aaPredicted RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 ZBED1O96006 694 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 THEGLP0DJG4 465 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 TCP1P17987 556 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 ADH7P40394 386 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SLC1A4P43007 532 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 MAPKAPK2P49137 400 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 RNASE9P60153 205 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 LRRC63Q05C16 580 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FOXR2Q6PJQ5 311 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FAM186BQ8IYM0 893 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 CARFQ8N187 725 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ANKS4BQ8N8V4 417 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SPATA4Q8NEY3 305 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ATL1Q8WXF7 558 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 CCT6BQ92526 530 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ERLEC1Q96DZ1 483 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 OLFM3Q96PB7 478 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 RNF38Q9H0F5 515 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PANK4Q9NVE7 773 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ENOPH1Q9UHY7 261 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SPDYE2BA6NHP3 402 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 A6NL46 340 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 TISP43B9A030 160 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 B9A039 149 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SHOXO15266 292 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 ALDH1A2O94788 518 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 ATP6V1G2O95670 118 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SPDYE6P0CI01 402 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 EPB41P11171 864 aaKnown RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 ETS2P15036 469 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 PON1P27169 355 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 COASYQ13057 564 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SQLEQ14534 574 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 TPGS2Q68CL5 300 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 CREG2Q8IUH2 290 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 ZC3H10Q96K80 434 aaKnown RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 CAMK1GQ96NX5 476 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 CDH19Q9H159 772 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 STX16-NPEPL1H3BU86 382 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 ZC3H11AO75152 810 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPARC-201ENST00000231061 SEMA3DO95025 777 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 GOSR1O95249 250 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 ICAM2P13598 275 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 GDI2P50395 445 aaKnown RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 FXR2P51116 673 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPARC-201ENST00000231061 DSG2Q14126 1118 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 FRG1Q14331 258 aaKnown RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 SLC9C1Q4G0N8 1177 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 PXYLP1Q8TE99 480 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 GRK7Q8WTQ7 553 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 SYN2Q92777 582 aaPredicted RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 LPPQ93052 612 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 OTUD5Q96G74 571 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 PPP1R10Q96QC0 940 aaKnown RBP8.65□□□□□ -1.02
SPARC-201ENST00000231061 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 BTBD7Q9P203 1132 aa8.65□□□□□ -1.02
SPARC-201ENST00000231061 TRAV20A0A0B4J274 112 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 H3BRB1 525 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 GRIN3BO60391 1043 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 KERAO60938 352 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 FTCDO95954 541 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 CSF2RAP15509 400 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 CNTFP26441 200 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 PEX3P56589 373 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 GTF2IP78347 998 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms