RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CYP17A1P05093 508 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 ACADSBP45954 432 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 MLLT6P55198 1093 aaPredicted RBP13.28□□□□□ -0.28
LSM5-201ENST00000223084 JAM2P57087 298 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 PDCLQ13371 301 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 DHCR24Q15392 516 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 MEA1Q16626 185 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 TMEM110Q86TL2 294 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 STK32AQ8WU08 396 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 RNF139Q8WU17 664 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
LSM5-201ENST00000223084 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 CDK5RAP1Q96SZ6 601 aaKnown RBP13.28□□□□□ -0.28
LSM5-201ENST00000223084 NELL2Q99435 816 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 LMAN1LQ9HAT1 526 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 MARCH2Q9P0N8 246 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
LSM5-201ENST00000223084 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
LSM5-201ENST00000223084 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
LSM5-201ENST00000223084 NFATC1O95644 943 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SERPINC1P01008 464 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 LTFP02788 710 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 KLKB1P03952 638 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 FYNP06241 537 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 MMEP08473 750 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 CHRNB1P11230 501 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SOX5P35711 763 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 GALK1P51570 392 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 NR1H3Q13133 447 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 FILIP1LQ4L180 1135 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 HTR3DQ70Z44 454 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 FMNL3Q8IVF7 1028 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SLC20A1Q8WUM9 679 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 IRGQQ8WZA9 623 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 CLDN23Q96B33 292 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 MSANTD3Q96H12 275 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 PIWIL1Q96J94 861 aaKnown RBP13.27□□□□□ -0.29
LSM5-201ENST00000223084 PPP1R13BQ96KQ4 1090 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 SPAG5Q96R06 1193 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 LHX5Q9H2C1 402 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 FBRSL1Q9HCM7 1045 aaKnown RBP13.27□□□□□ -0.29
LSM5-201ENST00000223084 ABCC13Q9NSE7 274 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
LSM5-201ENST00000223084 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
LSM5-201ENST00000223084 NCAM2O15394 837 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
LSM5-201ENST00000223084 ERBB2P04626 1255 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 STAT1P42224 750 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 SLC6A11P48066 632 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 TPM4P67936 248 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 COG7P83436 770 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 FANCCQ00597 558 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 ARID5AQ03989 594 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 TCF15Q12870 199 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 TAF5Q15542 800 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 PTPN20Q4JDL3 420 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 Q6ZNB5 142 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 WDFY4Q6ZS81 3184 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 P2RY13Q9BPV8 354 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 OLA1Q9NTK5 396 aaKnown RBP13.26□□□□□ -0.29
LSM5-201ENST00000223084 NOCTQ9UK39 431 aaKnown RBP13.26□□□□□ -0.29
LSM5-201ENST00000223084 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
LSM5-201ENST00000223084 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
LSM5-201ENST00000223084 H0Y858 1186 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CAVIN2O95810 425 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 EGFP01133 1207 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 ADH5P11766 374 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 NCAM1P13591 858 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CHRNB2P17787 502 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CORO1AP31146 461 aaKnown RBP13.25□□□□□ -0.29
LSM5-201ENST00000223084 OPRD1P41143 372 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 NR1I3Q14994 352 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 C2CD6Q53TS8 623 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 TMEM196Q5HYL7 178 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 OR6B2Q6IFH4 312 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 MSANTD2Q6P1R3 559 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 Q6ZS52 159 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 FAM183BPQ6ZVS7 135 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms