RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 RNF139Q8WU17 664 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 ZNF830Q96NB3 372 aaPredicted RBP20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 MCEEQ96PE7 176 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 DESI2Q9BSY9 194 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 NACA2Q9H009 215 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 KCNF1Q9H3M0 494 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 GDE1Q9NZC3 331 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 RASAL2Q9UJF2 1139 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 TFR2Q9UP52 801 aa20.34■□□□□ 0.85
SNAPC2-201ENST00000221573 SIGLEC16A6NMB1 481 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 C2CD4DB7Z1M9 353 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 ARHGAP6O43182 974 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 PRAMEF12O95522 483 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 MBL2P11226 248 aaPredicted RBP20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 LAMP2P13473 410 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 ATP5C1P36542 298 aaKnown RBP20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 AVPR1AP37288 418 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 MAGEA1P43355 309 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 RPL7AP62424 266 aaKnown RBP20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 GPC5P78333 572 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 DCAF6Q58WW2 860 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 BEND5Q7L4P6 421 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 OTOP3Q7RTS5 596 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 ZNF276Q8N554 614 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 DQX1Q8TE96 717 aaKnown RBP20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 CTNNBL1Q8WYA6 563 aaPredicted RBP20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 TRIM62Q9BVG3 475 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 PARVAQ9NVD7 372 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 SFMBT1Q9UHJ3 866 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 FAM50BQ9Y247 325 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 PCDHA13Q9Y5I0 950 aa20.33■□□□□ 0.85
SNAPC2-201ENST00000221573 CYP1A2P05177 515 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TMEM253P0C7T8 217 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 RFC1P35251 1148 aaPredicted RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ZXDBP98169 803 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 AAK1Q2M2I8 961 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 FAM78AQ5JUQ0 283 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 C10orf76Q5T2E6 689 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 MSANTD2Q6P1R3 559 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 MIB1Q86YT6 1006 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ARID3BQ8IVW6 561 aaPredicted RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ADAM32Q8TC27 787 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 RPGRIP1Q96KN7 1286 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ZFRQ96KR1 1074 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ASB16Q96NS5 453 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 CDK5RAP1Q96SZ6 601 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ADAM33Q9BZ11 813 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 OLA1Q9NTK5 396 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 SMPD4Q9NXE4 827 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 ZMYM5Q9UJ78 669 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 DNMT3LQ9UJW3 386 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 CCL26Q9Y258 94 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 USTQ9Y2C2 406 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 CPQQ9Y646 472 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 SCINQ9Y6U3 715 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 SOBPA7XYQ1 873 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 MSI1O43347 362 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 IPO7O95373 1038 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 PFKLP17858 780 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TFE3P19532 575 aaPredicted RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 NOS2P35228 1153 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 MATKP42679 507 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 SLC7A9P82251 487 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 DCUN1D2Q6PH85 259 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 KLHDC10Q6PID8 442 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TADA2BQ86TJ2 420 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TAC4Q86UU9 113 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TDRD5Q8NAT2 981 aaKnown RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 RXFP2Q8WXD0 754 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 USP13Q92995 863 aaPredicted RBP20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 CFAP57Q96MR6 1250 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 NUP85Q9BW27 656 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 TRIM7Q9C029 511 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 SMOC2Q9H3U7 446 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 MARCH2Q9P0N8 246 aa20.32■□□□□ 0.84
SNAPC2-201ENST00000221573 C2CD4BA6NLJ0 364 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 FCARP24071 287 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 OGDHQ02218 1023 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 OTUD1Q5VV17 481 aaPredicted RBP20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 ARCQ7LC44 396 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 RIN3Q8TB24 985 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 SMARCD2Q92925 531 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 ACSF2Q96CM8 615 aaPredicted RBP20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 RSPRY1Q96DX4 576 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 DDX23Q9BUQ8 820 aaKnown RBP20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 GKN1Q9NS71 199 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 CALCOCO1Q9P1Z2 691 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 EPS15L1Q9UBC2 864 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 INTUQ9ULD6 942 aa20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 ZFP37Q9Y6Q3 630 aaPredicted RBP20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 KIF26AQ9ULI4 1882 aaPredicted RBP20.31■□□□□ 0.84
SNAPC2-201ENST00000221573 RCCD1A6NED2 376 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 NRDCO43847 1150 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 PDGFRAP16234 1089 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 VIPR2P41587 438 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 SULT1E1P49888 294 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 TTC16Q8NEE8 873 aa20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 ATXN2LQ8WWM7 1075 aaKnown RBP20.3■□□□□ 0.84
SNAPC2-201ENST00000221573 NPY6RQ99463 290 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms