RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 KLHL4Q9C0H6 718 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 PTPRMP28827 1452 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 MPOP05164 745 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 PYGMP11217 842 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 SOX6P35712 828 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 KPNB1Q14974 876 aaKnown RBP18.37■□□□□ 0.53
EXTL3-201ENST00000220562 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 SNTG2Q9NY99 539 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 ARHGAP20Q9P2F6 1191 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 SPACA6W5XKT8 324 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 SPATA31A6Q5VVP1 1343 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 RGS5O15539 181 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 RBP1P09455 135 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
EXTL3-201ENST00000220562 FAM153AQ9UHL3 310 aa18.37■□□□□ 0.53
EXTL3-201ENST00000220562 CBX4O00257 560 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 PTPN11Q06124 597 aaPredicted RBP18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ZNF284Q2VY69 593 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 O00370 1275 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 MCL1Q07820 350 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 B3GALNT2Q8NCR0 500 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 TBC1D13Q9NVG8 400 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 A0A1B0GW55 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 GNG14A0A1W2PPG7 69 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 MGAT4DA6NG13 374 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L2P0CJ85 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L3P0CJ86 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L4P0CJ87 422 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L5P0CJ88 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L6P0CJ89 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4L7P0CJ90 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ZNF614Q8N883 585 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 USP6NLQ92738 828 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 CATSPER2Q96P56 530 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ADGRE3Q9BY15 652 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 CEP41Q9BYV8 373 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 DUX4Q9UBX2 424 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 TMCC3Q9ULS5 477 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 UBXN8O00124 270 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 PEX5P50542 639 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 CCNG1P51959 295 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 MPP3Q13368 585 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 LY6KQ17RY6 165 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 CYP4Z1Q86W10 505 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ARHGEF19Q8IW93 802 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 FBXO25Q8TCJ0 367 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 TUBGCP4Q9UGJ1 667 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 STAU1O95793 577 aaKnown RBP18.36■□□□□ 0.53
EXTL3-201ENST00000220562 ZCCHC18P0CG32 403 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 RPS6KB2Q9UBS0 482 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 PADI4Q9UM07 663 aa18.36■□□□□ 0.53
EXTL3-201ENST00000220562 SPTLC1O15269 473 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
EXTL3-201ENST00000220562 KRT75O95678 551 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 PSMC6P62333 389 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 PGM5Q15124 567 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 ZSWIM2Q8NEG5 633 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 MROH8Q9H579 483 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 TRPM5Q9NZQ8 1165 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 SLC24A2Q9UI40 661 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 VCLP18206 1134 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 POU1F1P28069 291 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 HALP42357 657 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 PHKG1Q16816 387 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 ALFQ53S48 1182 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 MTERF3Q96E29 417 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 CELF6Q96J87 481 aaKnown RBP18.35■□□□□ 0.53
EXTL3-201ENST00000220562 DCLK3Q9C098 648 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
EXTL3-201ENST00000220562 GTF2A1LQ9UNN4 478 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 ACOT9Q9Y305 439 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 WDR27A2RRH5 827 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 SLC1A6P48664 564 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 FGD2Q7Z6J4 655 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 TXNRD3Q86VQ6 643 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 ACOX2Q99424 681 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 CKMP06732 381 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 GLI1P08151 1106 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 TMED10P49755 219 aaKnown RBP18.35■□□□□ 0.53
EXTL3-201ENST00000220562 CYP3A43Q9HB55 503 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 IL1RAPL1Q9NZN1 696 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 AP4S1Q9Y587 144 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 MICAL2O94851 1124 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 CTNNAL1Q9UBT7 734 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 TSC22D4Q9Y3Q8 395 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
EXTL3-201ENST00000220562 PPRC1Q5VV67 1664 aaKnown RBP18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SLCO1B7G3V0H7 640 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 TECPR2O15040 1411 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 MCOLN2Q8IZK6 566 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 ABRAQ8N0Z2 381 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SPIRE2Q8WWL2 714 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 LACRTQ9GZZ8 138 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
EXTL3-201ENST00000220562 SNTNA6NMZ2 147 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms