RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CHKAP35790 457 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 POLE2P56282 527 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 SNF8Q96H20 258 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ARHGAP39Q9C0H5 1083 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 CDT1Q9H211 546 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 KDM4CQ9H3R0 1056 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ITGB5P18084 799 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 INPP1P49441 399 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 MLLT1Q03111 559 aaPredicted RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 TUSC3Q13454 348 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 UBP1Q9NZI7 540 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 CCDC188H7C350 402 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 DDX5P17844 614 aaKnown RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 TNFSF9P41273 254 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 VSNL1P62760 191 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 BCL2L1Q07817 233 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 TAF11Q15544 211 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 C4orf33Q8N1A6 199 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 CAPN11Q9UMQ6 739 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 V9GYQ6 96 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 SPACA6W5XKT8 324 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 FGF19O95750 216 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 DARSP14868 501 aaKnown RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 HIF1AQ16665 826 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 SNAP47Q5SQN1 464 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ATG16L1Q676U5 607 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 CCDC124Q96CT7 223 aaKnown RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 APOL2Q9BQE5 337 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 DUSP10Q9Y6W6 482 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 F8VP50 259 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ITGB6P18564 788 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 HALP42357 657 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 NRIP1P48552 1158 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ALDH18A1P54886 795 aaKnown RBP14.2□□□□□ -0.14
SIX4-201ENST00000216513 TTLL9Q3SXZ7 439 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 ABCC13Q9NSE7 274 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 APPL1Q9UKG1 709 aa14.2□□□□□ -0.14
SIX4-201ENST00000216513 PSMD10O75832 226 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 RENBPP51606 427 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 YWHAZP63104 245 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 DDX39BQ13838 428 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 PCBP1Q15365 356 aaKnown RBP eCLIP14.19□□□□□ -0.14
SIX4-201ENST00000216513 CDH9Q9ULB4 789 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 DYRK3O43781 588 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 CALCAP01258 141 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 JCHAINP01591 159 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 OCM2P0CE71 109 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 OCMP0CE72 109 aaPredicted RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 HSPA8P11142 646 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 CYP2A6P11509 494 aaPredicted RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 PBX3P40426 434 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 TOB1P50616 345 aaPredicted RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 PLIN5Q00G26 463 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 CNKSR3Q6P9H4 555 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 SLC47A2Q86VL8 602 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 TSPAN17Q96FV3 270 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 GULP1Q9UBP9 304 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 NALCNQ8IZF0 1738 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 COMTP21964 271 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 GRK3P35626 688 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 ZNF438Q7Z4V0 828 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 DEFB106AQ8N104 65 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 ACO2Q99798 780 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 TRMT6Q9UJA5 497 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 SEC24DO94855 1032 aaPredicted RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 CYP11B1P15538 503 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 PON1P27169 355 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 XRCC4Q13426 336 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 TRIM65Q6PJ69 517 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 AUTS2Q8WXX7 1259 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 ZFP42Q96MM3 310 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 COL1A2P08123 1366 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 PER2O15055 1255 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 RASSF9O75901 435 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 TNNI3P19429 210 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 PTENP60484 403 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 GLE1Q53GS7 698 aaKnown RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 TMEM63BQ5T3F8 832 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 ZNF557Q8N988 423 aaPredicted RBP14.19□□□□□ -0.14
SIX4-201ENST00000216513 CALML6Q8TD86 181 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 OTULINQ96BN8 352 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 C9orf72Q96LT7 481 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.19□□□□□ -0.14
SIX4-201ENST00000216513 PKD2L2Q9NZM6 624 aa14.19□□□□□ -0.14
SIX4-201ENST00000216513 CFIP05156 583 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 FUT10Q6P4F1 479 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 TKTL2Q9H0I9 626 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 PLK2Q9NYY3 685 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 WWOXQ9NZC7 414 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 RBP3P10745 1247 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 TCN1P20061 433 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms