RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 BMP8BP34820 402 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 PSEN1P49768 467 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 COPS2P61201 443 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 DEUP1Q05D60 604 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 LONRF2Q1L5Z9 754 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 ODF2Q5BJF6 829 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 TEKT4Q8WW24 435 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 RNF25Q96BH1 459 aaPredicted RBP16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 OSER1Q9NX31 292 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 INSL5Q9Y5Q6 135 aa16.62■□□□□ 0.25
SNRPD3-201ENST00000215829 EFCAB8A8MWE9 144 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 PI4K2BG5E9Z4 385 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 LPXNO60711 386 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 HMGA1P17096 107 aaKnown RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 CETN2P41208 172 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 TWF1Q12792 350 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 NME3Q13232 169 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 GPM6BQ13491 265 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 VEPH1Q14D04 833 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 RAB30Q15771 203 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 ERMARDQ5T6L9 678 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 PDE12Q6L8Q7 609 aaKnown RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 SLC13A5Q86YT5 568 aaPredicted RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 CCDC50Q8IVM0 306 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 KCTD6Q8NC69 237 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 DQX1Q8TE96 717 aaKnown RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 HSPH1Q92598 858 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 MYRFLQ96LU7 910 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 PIGVQ9NUD9 493 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 CLIC5Q9NZA1 410 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 MAGED2Q9UNF1 606 aaPredicted RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 LRRD1A4D1F6 860 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 C3orf70A6NLC5 250 aaPredicted RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 MDM4O15151 490 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 TADA3O75528 432 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 CSPG5O95196 566 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 IGLV3-25P01717 112 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 KDELR1P24390 212 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 IRS1P35568 1242 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 EPHB3P54753 998 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 MFSD7Q6UXD7 560 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 TAC4Q86UU9 113 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 FAM131BQ86XD5 332 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 RNF139Q8WU17 664 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 NKX2-4Q9H2Z4 354 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 FBXW11Q9UKB1 542 aa16.61■□□□□ 0.25
SNRPD3-201ENST00000215829 KRIT1O00522 736 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 GLUD1P00367 558 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 C1RP00736 705 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 RALAP11233 206 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 GBP1P32455 592 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 TERF1P54274 439 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 PLD1Q13393 1074 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 EIF4EBP2Q13542 120 aaPredicted RBP16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 SPOCD1Q6ZMY3 1216 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 KREMEN2Q8NCW0 462 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 TRMT2BQ96GJ1 504 aaKnown RBP16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 SNRNP25Q9BV90 132 aaKnown RBP16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 OSBPL8Q9BZF1 889 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 SMOC2Q9H3U7 446 aa16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNRPD3-201ENST00000215829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■□□□ 13.1
SNRPD3-201ENST00000215829 RARGP13631 454 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 PTPN7P35236 360 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 CDKN2BP42772 138 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 CXCR3P49682 368 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 ARSEP51690 589 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 CLCN4P51793 760 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 TUBB4BP68371 445 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 C2orf54Q08AI8 447 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 PDK2Q15119 407 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 LLGL1Q15334 1064 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 TAF12Q16514 161 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 PPP2R5EQ16537 467 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 TAZQ16635 292 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 SNX30Q5VWJ9 437 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.251e-9■□□□□ 8.2
SNRPD3-201ENST00000215829 RSRC2Q7L4I2 434 aaKnown RBP16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 DNAJB7Q7Z6W7 309 aaPredicted RBP16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 PSTKQ8IV42 348 aaKnown RBP16.59■□□□□ 0.25
SNRPD3-201ENST00000215829 PDZD8Q8NEN9 1154 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms