RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 SLC7A3Q8WY07 619 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ALKBH8Q96BT7 664 aaKnown RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ANKRD27Q96NW4 1050 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 OXCT2Q9BYC2 517 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 HMGXB4Q9UGU5 601 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ENO3P13929 434 aaPredicted RBP17.35■□□□□ 0.37
CTDP1-201ENST00000075430 FGFR3P22607 806 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ADORA2AP29274 412 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 LGSNQ5TDP6 509 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ZNF677Q86XU0 584 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 PHTF2Q8N3S3 785 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 SNX31Q8N9S9 440 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 GSDMBQ8TAX9 411 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 CYTH4Q9UIA0 394 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 SOX13Q9UN79 622 aa17.35■□□□□ 0.37
CTDP1-201ENST00000075430 ACTR2P61160 394 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 TRMT5Q32P41 509 aaKnown RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 CMC1Q7Z7K0 106 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 VCLP18206 1134 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 GRIA2P42262 883 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 ETV4P43268 484 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 MRPS5P82675 430 aaKnown RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 KRT76Q01546 638 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 B3GNT9Q6UX72 402 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 TRIM50Q86XT4 487 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 ICA1LQ8NDH6 482 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 STKLD1Q8NE28 680 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 CLEC4DQ8WXI8 215 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 DEFB129Q9H1M3 183 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 DHX35Q9H5Z1 703 aaKnown RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 TLE6Q9H808 572 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 PRPSAP2O60256 369 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 AMHP03971 560 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 PMLP29590 882 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 COPAP53621 1224 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 ACTR3P61158 418 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 PDK3Q15120 406 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 NRF1Q16656 503 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 TRIM72Q6ZMU5 477 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 DHDDSQ86SQ9 333 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 NKD2Q969F2 451 aaPredicted RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 PPP2R3CQ969Q6 453 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 SEMA6AQ9H2E6 1030 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 DRG1Q9Y295 367 aaKnown RBP17.34■□□□□ 0.37
CTDP1-201ENST00000075430 PLLPQ9Y342 182 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 UBIAD1Q9Y5Z9 338 aa17.34■□□□□ 0.37
CTDP1-201ENST00000075430 HNRNPCL1O60812 293 aaKnown RBP17.33■□□□□ 0.37
CTDP1-201ENST00000075430 DGAT1O75907 488 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 JAK3P52333 1124 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 MAP7Q14244 749 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 PDK1Q15118 436 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 CNGA3Q16281 694 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 COPS7BQ9H9Q2 264 aaPredicted RBP17.33■□□□□ 0.37
CTDP1-201ENST00000075430 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.37
CTDP1-201ENST00000075430 TTLL3Q9Y4R7 772 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.37
CTDP1-201ENST00000075430 KRT38O76015 456 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 KRT7P08729 469 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 VAV1P15498 845 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 NUDT2P50583 147 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 TBL3Q12788 808 aaKnown RBP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 TRAPPC12Q8WVT3 735 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 AZIN2Q96A70 460 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 TIPINQ9BVW5 301 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 ZNF711Q9Y462 761 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 PLSCR1O15162 318 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 TBC1D12O60347 775 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 NUMBP49757 651 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 YWHAZP63104 245 aaKnown RBP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 FSTL1Q12841 308 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 CCNYQ8ND76 341 aa17.33■□□□□ 0.36
CTDP1-201ENST00000075430 WDR55Q9H6Y2 383 aaPredicted RBP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 DDX56Q9NY93 547 aaKnown RBP17.33■□□□□ 0.36
CTDP1-201ENST00000075430 WDR27A2RRH5 827 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 MAGEB3O15480 346 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 MT-CO1P00395 513 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 CCR10P46092 362 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 GALK1P51570 392 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 RNF111Q6ZNA4 994 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 RNF149Q8NC42 400 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 FAM81AQ8TBF8 368 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 MZB1Q8WU39 189 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 APOL2Q9BQE5 337 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 S100A14Q9HCY8 104 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 STX16-NPEPL1H3BU86 382 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
CTDP1-201ENST00000075430 CSPG5O95196 566 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 ERBB2P04626 1255 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms