RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 IL18RAPO95256 599 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 SNRPAP09012 282 aaKnown RBP8.6□□□□□ -1.03
CDC27-201ENST00000066544 RABGGTBP53611 331 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 RASA2Q15283 850 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 SLC25A41Q8N5S1 370 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 INPP5DQ92835 1189 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 ALKBH8Q96BT7 664 aaKnown RBP8.6□□□□□ -1.03
CDC27-201ENST00000066544 NSL1Q96IY1 281 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
CDC27-201ENST00000066544 RLFQ13129 1914 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 CCDC78A2IDD5 438 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 C22orf31O95567 290 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 CYP2F1P24903 491 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 GRM1Q13255 1194 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 OLIG2Q13516 323 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 UNC5AQ6ZN44 842 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 DHRS4Q9BTZ2 278 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 OSBPL1AQ9BXW6 950 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 RBPJLQ9UBG7 517 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 TTLL3Q9Y4R7 772 aa8.6□□□□□ -1.03
CDC27-201ENST00000066544 PAPSS1O43252 624 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 LYPLA1O75608 230 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 CCDC130P13994 396 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ADORA2AP29274 412 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ETV4P43268 484 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 AQP5P55064 265 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 RBP5P82980 135 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 PPP2R5DQ14738 602 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 LGMNQ99538 433 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 POPDC2Q9HBU9 364 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ERAP1Q9NZ08 941 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 A8MXQ7 604 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 CCDC22O60826 627 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 RPL10AP62906 217 aaKnown RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 CDK16Q00536 496 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 THOC5Q13769 683 aaKnown RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ACSBG2Q5FVE4 666 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 CCNYQ8ND76 341 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 DEPDC1BQ8WUY9 529 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 E2F7Q96AV8 911 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ACSS2Q9NR19 701 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TRIP11Q15643 1979 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 A6NJR5 290 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 MEI4A8MW99 385 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 CAPN9O14815 690 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 GSC2O15499 205 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 DLDP09622 509 aaKnown RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 AKAP5P24588 427 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 SLC18A1P54219 525 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 SLC10A2Q12908 348 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 C4orf50Q6ZRC1 276 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 POU5F2Q8N7G0 328 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 AGR3Q8TD06 166 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 OXNAD1Q96HP4 312 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 AGAP3Q96P47 875 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TRIM6Q9C030 488 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 USP12O75317 370 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 LGALS2P05162 132 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 PFKMP08237 780 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 GCKP35557 465 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 PGM1P36871 562 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 NEK3P51956 506 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TTLL4Q14679 1199 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 CRYMQ14894 314 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 TTC39BQ5VTQ0 682 aaPredicted RBP8.59□□□□□ -1.03
CDC27-201ENST00000066544 HACE1Q8IYU2 909 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 HIPK4Q8NE63 616 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 STMN2Q93045 179 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 EBF4Q9BQW3 602 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 PPCSQ9HAB8 311 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
CDC27-201ENST00000066544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 NDC80O14777 642 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 KCNA4P22459 653 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 ADCYAP1R1P41586 468 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 HDAC4P56524 1084 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 TAZQ16635 292 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 PLPPR4Q7Z2D5 763 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 ZMAT2Q96NC0 199 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 BTBD10Q9BSF8 475 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 C20orf27Q9GZN8 174 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SLC15A5A6NIM6 579 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 GABBR2O75899 941 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 BAG2O95816 211 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 PITX1P78337 314 aaPredicted RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 PRKD1Q15139 912 aaPredicted RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 BOLA3Q53S33 107 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms