RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MRGBPQ9NV56 204 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 DNMT3LQ9UJW3 386 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 PLIN4Q96Q06 1357 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 CHUKO15111 745 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 KRT4P19013 534 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 POLR2EP19388 210 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 AARSP49588 968 aaKnown RBP eCLIP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 CLNS1AP54105 237 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 PRKCZQ05513 592 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 KYNUQ16719 465 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 LONRF1Q17RB8 773 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SLC24A5Q71RS6 500 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 TFAP2DQ7Z6R9 452 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 PRDM16Q9HAZ2 1276 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 AVENQ9NQS1 362 aaPredicted RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 GIMAP4Q9NUV9 329 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SMARCAL1Q9NZC9 954 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CYP2C18P33260 490 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CRHR2Q13324 411 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 TUSC3Q13454 348 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 IL17RAQ96F46 866 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CORO1BQ9BR76 489 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ARHGAP20Q9P2F6 1191 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 APOA4P06727 396 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 SPATA31C1P0DKV0 1188 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 NOS2P35228 1153 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 SMARCB1Q12824 385 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CBWD6Q4V339 395 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 FNDC3BQ53EP0 1204 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CBWD3Q5JTY5 395 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CBWD5Q5RIA9 395 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 C3orf20Q8ND61 904 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 GBP5Q96PP8 586 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 PSD3Q9NYI0 1048 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 WWOXQ9NZC7 414 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 RWDD3Q9Y3V2 267 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 FAM208AQ9UK61 1670 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 FRMD3A2A2Y4 597 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 E5RJQ4 531 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CLASP2O75122 1294 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 NR2C2P49116 596 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CCNG2Q16589 344 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 AGAP9Q5VTM2 703 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CCNI2Q6ZMN8 369 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 B3GALNT2Q8NCR0 500 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 SUSD6Q92537 303 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 SGSM3Q96HU1 749 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 VAV3Q9UKW4 847 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 PTCH2Q9Y6C5 1203 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CXCL14O95715 111 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 HDCP19113 662 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 NDUFV1P49821 464 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 TRIM68Q6AZZ1 485 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 TOP6BLQ8N6T0 577 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 LENG9Q96B70 501 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 DNAJC19Q96DA6 116 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 GAS2L1Q99501 681 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ATRNL1Q5VV63 1379 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ANGPT2O15123 496 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 TIMM44O43615 452 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 PPP1R11O60927 126 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 PRLRP16471 622 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ARF4P18085 180 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CSE1LP55060 971 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 ATG4AQ8WYN0 398 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 OTUB1Q96FW1 271 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CELF6Q96J87 481 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 CCDC138Q96M89 665 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 RIC8BQ9NVN3 520 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 TRHDEQ9UKU6 1024 aa10.68□□□□□ -0.7
NIPAL3-201ENST00000003912 B4GALT5O43286 388 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 FGF19O95750 216 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 GLUD1P00367 558 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ADRB2P07550 413 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 CYP2A6P11509 494 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MZF1P28698 734 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 CHKAP35790 457 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 CASP5P51878 434 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 POU4F1Q01851 419 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 PPP3CAQ08209 521 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MYO1HQ8N1T3 1032 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 LPCAT1Q8NF37 534 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 WNT8BQ93098 351 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 TKTL2Q9H0I9 626 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ADA2Q9NZK5 511 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 TBC1D3BA6NDS4 549 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 SMPD1P17405 629 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 FOXD4Q12950 439 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ZBTB41Q5SVQ8 909 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MIPOL1Q8TD10 442 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms