RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Hmgb4Q6P8W9 181 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Gpatch2lQ6PE65 482 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Fam102aQ78T81 392 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 DcstampQ7TNJ0 470 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cgrrf1Q8BMJ7 332 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Phactr3Q8BYK5 558 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Erich5Q8K0S2 362 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Mkl1Q8K4J6 964 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 SmtnQ921U8 923 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Ubxn11Q9D572 484 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Actrt2Q9D9L5 377 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Chst7Q9EP78 484 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Lima1Q9ERG0 753 aaKnown RBP13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Kdelc1Q9JHP7 502 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Krt16Q9Z2K1 469 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Rtl9Q32KG4 1339 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Gm11985A0A1B0GS61 206 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Olfr271-ps1A0A1L1SQH2 283 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Map7d3A2AEY4 876 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Abcb5B5X0E4 1255 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 PiggD3Z3Y1 983 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Bmpr2O35607 1038 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Asgr1P34927 284 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cap1P40124 474 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cdh8P97291 799 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Lrrn4clQ3TYX2 239 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Ntrk1Q3UFB7 799 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Tom1l2Q5SRX1 507 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Il17aQ62386 158 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cyp2c29Q64458 490 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Sv2cQ69ZS6 727 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Rasa4Q6PFQ7 802 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Olfr533Q7TRT7 320 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 HomezQ80W88 542 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Ppp1r12bQ8BG95 976 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Smndc1Q8BGT7 238 aaKnown RBP13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Clec4gQ8BNX1 294 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Tyw3Q8BSA9 257 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Nat14Q8BVG8 206 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Hdac7Q8C2B3 938 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 PigwQ8C398 503 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Acvr1cQ8K348 493 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Zdhhc7Q91WU6 308 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 HlcsQ920N2 722 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Tcaf2Q921K8 919 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Vta1Q9CR26 309 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Klhl35Q9CZ49 574 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Nde1Q9CZA6 344 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Krt7Q9DCV7 457 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Dmap1Q9JI44 468 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Fut2Q9JL27 347 aa13.57□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Smok3cA0A087WSF2 504 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Zbed6D2EAC2 980 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Vmn2r84D3YWE3 849 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Olfr611K7N609 323 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Olfr612L7N462 323 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 ChgbP16014 677 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 PtpraP18052 829 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Vav1P27870 845 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 S100bP50114 92 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Dsc2P55292 902 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cdk7Q03147 346 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 ProcrQ64695 242 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Rapgefl1Q68EF8 662 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Srd5a1Q68FF9 255 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Klhl38Q8BSF5 581 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 CopaQ8CIE6 1224 aaKnown RBP13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Upb1Q8VC97 393 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Taf11Q99JX1 211 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Txndc12Q9CQU0 170 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Trim42Q9D2H5 723 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Serpinb9bQ9DAV6 377 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Scyl3Q9DBQ7 735 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Neu2Q9JMH3 379 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Msh5Q9QUM7 833 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Hic1Q9R1Y5 733 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Arid2E9Q7E2 1828 aa13.56□□□□□ -0.24
Ssr1-203ENSMUST00000225246 UprtB1AVZ0 310 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 C130060K24RikG3UWA8 416 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 FaahO08914 579 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 SpibO35906 267 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Il2rbP16297 539 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Lta4hP24527 611 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Scg3P47867 471 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Pex2P55098 305 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Mmp20P57748 482 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 4930430A15RikQ05AC5 485 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Pdss1Q33DR2 409 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Znf746Q3U133 652 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Proser1Q5PRE5 913 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Traf3Q60803 567 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 FcgrtQ61559 365 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Gdpd5Q640M6 607 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Acot5Q6Q2Z6 421 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Atp6v0d2Q80SY3 350 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Cdkn3Q810P3 211 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Pak5Q8C015 719 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 CherpQ8CGZ0 936 aaKnown RBP13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Kctd15Q8K0E1 283 aa13.55□□□□□ -0.24
Ssr1-203ENSMUST00000225246 Plekhh3Q8VCE9 796 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 82 ms