RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Ces2aQ8QZR3 558 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 PolhQ9JJN0 694 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 NbnQ9R207 751 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 PrebQ9WUQ2 417 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 KcpQ3U492 1550 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Fam71aB7XG49 585 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 9230113P08RikD3YWX3 137 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Gcom1E9PZ54 550 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 LdhcP00342 332 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Fam172aQ3TNH5 417 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 MyzapQ3UIJ9 466 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Skap1Q3UUV5 355 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 PkdccQ5RJI4 492 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ctc1Q5SUQ9 1212 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Slc6a4Q60857 630 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Otop2Q80SX5 563 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Mib1Q80SY4 1006 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 March4Q80TE3 409 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Uap1Q91YN5 522 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Syt17Q920M7 470 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Kbtbd12Q9D618 625 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Capns2Q9D7J7 247 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Abcg8Q9DBM0 673 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Bmp15Q9Z0L4 392 aa20.75■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ptpn9O35239 593 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Hoxb8P09632 243 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Zfy1P10925 782 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ptk2P34152 1090 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 CidecP56198 239 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Msi1Q61474 362 aaKnown RBP20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tbc1d31Q6NXY1 996 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Fnbp1Q80TY0 616 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Trim62Q80V85 475 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Btbd6Q8K2J9 488 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Nxnl1Q8VC33 217 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Sytl2Q99N50 950 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Slc25a11Q9CR62 314 aaKnown RBP20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Dph5Q9CWQ0 281 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Mgat4dQ9D4R2 373 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Llcfc1Q9D9P8 108 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 ParvaQ9EPC1 372 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Capn12Q9ER56 720 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cdh23Q99PF4 3354 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Gm1758F6VZZ1 202 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 DffaO54786 331 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tagap1P0CAX8 505 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tcf3P15806 651 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cd247P24161 164 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Gng11P61953 73 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Sox9Q04887 507 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Spire1Q52KF3 598 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tcf4Q60722 670 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Arnt2Q61324 712 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Fgfr1opQ66JX5 399 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Kdm1bQ8CIG3 826 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Pcdhb17Q91VD8 799 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Pcdhb1Q91Y08 818 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 MtrexQ9CZU3 1040 aaKnown RBP20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 DmgdhQ9DBT9 869 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 M1apQ9Z0E1 529 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 Htatip2Q9Z2G9 242 aa20.74■□□□□ 0.91
Lig3-204ENSMUST00000131537 TrioQ0KL02 3102 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Rpl9-ps6A0A140T8T4 192 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Znf804aA2AKY4 1200 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Grip2G3XA20 1042 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cldn2O88552 230 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Pim1P06803 397 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Rpl9P51410 192 aaKnown RBP20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Frat1P70339 274 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 NeblQ0II04 452 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 MlipQ5FW52 269 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Dll1Q61483 722 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Igfbp7Q61581 281 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ssxb10Q6XAR7 170 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Best2Q8BGM5 508 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Prpf39Q8K2Z2 665 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Nol6Q8R5K4 1152 aaKnown RBP20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Sfxn1Q99JR1 322 aa20.73■□□□□ 0.91
Lig3-204ENSMUST00000131537 Vsig10l2A0A140LHF2 776 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 TyrP11344 533 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 AdkP55264 361 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tmprss9P69525 1065 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ceacam5Q3UKK2 947 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cyp3a13Q64464 503 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 TCAIMQ66JZ4 499 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 C1qtnf6Q6IR41 264 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cacna2d2Q6PHS9 1154 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Fam129bQ8R1F1 749 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ola1Q9CZ30 396 aaKnown RBP20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Trp53inp1Q9QXE4 239 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Grk1Q9WVL4 564 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Col4a4Q9QZR9 1682 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 GlulP15105 373 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Klra1P20937 262 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Pafah1b1P63005 410 aaKnown RBP20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Tmem237Q3V0J1 427 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Runx3Q64131 409 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Znf821Q6PD05 413 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 SpopQ6ZWS8 374 aa20.72■□□□□ 0.91
Lig3-204ENSMUST00000131537 Usp3Q91W36 520 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms