RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Wdr27Q8C5V5 780 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Uba6Q8C7R4 1053 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ube2q2Q8K2Z8 378 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Lgi2Q8K4Z0 550 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Unc45aQ99KD5 944 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rnf135Q9CWS1 417 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ppp1r12aQ9DBR7 1029 aaKnown RBP22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 CenpkQ9ESN5 271 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Edf1Q9JMG1 148 aaKnown RBP22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcsk1nQ9QXV0 258 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Wdr54Q9R0D8 334 aa22.04■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Arhgap42B2RQE8 841 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Kif3cO35066 796 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 NoctO35710 429 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Arpp19P56212 112 aaKnown RBP22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Grm6Q5NCH9 871 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dmc1Q61880 340 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Krt12Q64291 487 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tdpoz4Q6YCH2 370 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rps6ka6Q7TPS0 764 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Gabbr2Q80T41 940 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Clec2eQ80XD9 204 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dus1lQ8C2P3 475 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ftsj1Q8CBC7 324 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Olfr348Q8VGK3 313 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcdha3Q91Y16 942 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 PigxQ99LV7 254 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rfc5Q9D0F6 339 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Syf2Q9D198 242 aaKnown RBP22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 PrelpQ9JK53 378 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Scamp5Q9JKD3 235 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ecel1Q9JMI0 775 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Drg2Q9QXB9 364 aaKnown RBP22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 6030498E09RikB1AX85 169 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Gm3460E9QAI8 215 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Zfp715G3X9T1 886 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Nek2O35942 443 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pkn1P70268 946 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Enpp3Q6DYE8 874 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Foxo6Q70KY4 559 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Trim62Q80V85 475 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Cdk5rap3Q99LM2 503 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 MajinQ9D992 256 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fundc1Q9DB70 155 aa22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rfc2Q9WUK4 349 aaKnown RBP22.03■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 5830411N06RikB3F5L4 1112 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Xbp1O35426 267 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ppargc1aO70343 797 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Itm2bO89051 266 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Mc4rP56450 332 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Neurog2P70447 263 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Atp8b1Q148W0 1251 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Serac1Q3U213 654 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tspyl3Q3UYP3 334 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Gm10488Q4KL05 212 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Sema3cQ62181 751 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tfdp2Q64163 446 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 DbhQ64237 622 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fnip1Q68FD7 1165 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Baiap3Q80TT2 1134 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Fam151aQ8QZW3 608 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Ccdc137Q8R0K4 290 aaKnown RBP22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pcdhb17Q91VD8 799 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Dhx58Q99J87 678 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Rilpl2Q99LE1 197 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Snx24Q9CRB0 169 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Themis3Q9CU24 569 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Pin4Q9CWW6 131 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tmem59Q9QY73 323 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tubd1Q9R1K7 455 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Padi3Q9Z184 664 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Diaph3Q9Z207 1171 aa22.02■■□□□ 1.12
Ccdc88a-202ENSMUST00000109477 Tp53bp1P70399 1969 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Atp8b4A2ANX3 1194 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Kcnt2D3Z649 1135 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Vmn2r100E9QAZ9 850 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Gm3336J3QMQ6 198 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 HelqQ2VPA6 1069 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ugt3a1Q3UP75 523 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Syne3Q4FZC9 975 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ksr1Q61097 873 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Mef2dQ63943 514 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Gpbp1l1Q6NZP2 473 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Cd300ldQ8VCH2 221 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Tmem30aQ8VEK0 364 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Olfr1502Q8VG66 316 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ccdc65Q8VHI7 493 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Nek8Q91ZR4 698 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Pde2aQ922S4 916 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Sntg2Q925E0 539 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Malrd1A2AJX4 2123 aa22.01■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Dnah12Q3V0Q1 3086 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Plxna3P70208 1872 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Igkv5-45A0A0B4J1J1 115 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Igkv17-121A0A0G2JFA8 117 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 AspgA0JNU3 564 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ccdc144bE9PVZ3 520 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Gm6205E9PZS2 359 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Adgrf2E9Q4J9 644 aa22■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Akap1O08715 857 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms