RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Znhit2Q9QY66 399 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Top3bQ9Z321 862 aaKnown RBP16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Stmn3O70166 180 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rdh7O88451 316 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Akt1P31750 480 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ptpn11P35235 597 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 ChpfQ6IQX7 774 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Utp6Q8VCY6 597 aaKnown RBP16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mrpl57Q9CQF8 102 aaKnown RBP16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Batf3Q9D275 118 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Serpinb9bQ9DAV6 377 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rnf25Q9QZR0 456 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gm8926L7MUE8 181 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ripk2P58801 539 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Yy1Q00899 414 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tgoln2Q62314 363 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tpp2Q64514 1262 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Dyrk4Q8BI55 632 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Snx16Q8C080 344 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ccdc137Q8R0K4 290 aaKnown RBP16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Art3Q8R2G4 371 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Brd8Q8R3B7 951 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Nme5Q99MH5 211 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rab11fip1Q9D620 645 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gtf3c6Q9D8P7 227 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 2210011C24RikA0A087WQ89 206 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Fam124aD3Z5V4 536 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Vmn2r77L7N2B7 854 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 TnfP06804 235 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cct8P42932 548 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Zcchc2Q69ZB8 1166 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mon1aQ6PDG8 556 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Btnl9Q8BJE2 536 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Swi5Q8K3D3 89 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rbmx2Q8R0F5 326 aaKnown RBP16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pole3Q9JKP7 145 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tagln3Q9R1Q8 199 aa16.24■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gm4307E9PZY4 289 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Klf6O08584 283 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tnfrsf11bO08712 401 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 UncxO08934 530 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Il13ra2O88786 383 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Scrn3Q3TMH2 418 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ticam2Q8BJQ4 232 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ints6lQ8BND4 861 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tmco6Q8BQX5 494 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ythdf3Q8BYK6 585 aaKnown RBP16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gtf2h3Q8VD76 309 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tns2Q8CGB6 1400 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Atp6v1e1P50518 226 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pon1P52430 355 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Olfm4Q3UZZ4 505 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Syce2Q505B8 171 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Sema5aQ62217 1077 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tcaf3Q6QR59 914 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tmc3Q7TQ69 1130 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ston1Q8CDJ8 730 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 AspgA0JNU3 564 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Fam209A2APA5 170 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 G430095P16RikE9Q913 147 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Itgb5O70309 798 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pdk4O70571 412 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 AurkcO88445 282 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Adrbk2Q3UYH7 688 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mical2Q8BML1 960 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Eef1akmt2Q9D853 244 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cyp4f14Q9EP75 524 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ifi30Q9ESY9 248 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 PlekQ9JHK5 350 aaKnown RBP16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Dctn3Q9Z0Y1 186 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Prrg1A2BFE8 218 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Zfp358E9Q8M1 571 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Magea4F2Z493 315 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 B020004C17RikJ3QP07 232 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 HdcP23738 662 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tnfaip2Q61333 691 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 RadilQ69Z89 1099 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ccdc85bQ6PDY0 202 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Znf445Q8R2V3 986 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Entpd5Q9WUZ9 427 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Olfr1123A2AT85 323 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Unc13dB2RUP2 1085 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Trim15G3UY57 292 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Atp9aO70228 1047 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 JundP15066 341 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 ItgalP24063 1163 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rfx2P48379 717 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tas2r131Q7M708 310 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Btbd10Q80X66 475 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pcmtd2Q8BHD8 359 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gtse1Q8R080 741 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Sh2d4aQ9D7V1 421 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Atp6v1g2Q9WTT4 118 aa16.23■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Itgb3O54890 787 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mmp10O55123 476 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Msh3P13705 1091 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rpl36P47964 105 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Iqsec1Q8R0S2 961 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tfr2Q9JKX3 798 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ptpn4Q9WU22 926 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms