RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Nrf1Q9WU00 503 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ltbp2O08999 1813 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Magea10A2AMW4 325 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Serpinb3aG3X9V8 387 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ap1b1O35643 943 aaKnown RBP11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 FynP39688 537 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pbxip1Q3TVI8 727 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ush1gQ80T11 461 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ccdc116Q80X53 541 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ddx19bQ8BZY3 494 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rsad2Q8CBB9 362 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Riox2Q8CD15 465 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Mboat7Q8CHK3 473 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 ZwilchQ8R060 589 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Q9CPS8 106 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ccdc103Q9D9P2 237 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Nap1l5Q9JJF0 156 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Azi2Q9QYP6 405 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Slc22a4Q9Z306 553 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Col11a2Q64739 1736 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Skor2A7M7C7 1008 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gm11397F6V5V4 377 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Zfp850J3QPC5 689 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 ZfaP23607 742 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 MatkP41242 505 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Stat3P42227 770 aaKnown RBP11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Kcnn2P58390 839 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cyp2e1Q05421 493 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 4930502E18RikQ14BQ3 236 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Spag6Q3V0U9 509 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Brsk1Q5RJI5 778 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Nr1d2Q60674 576 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Trim21Q62191 470 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ugt1a9Q62452 528 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rasgrp3Q6NZH9 691 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Senp6Q6P7W0 1132 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Herc4Q6PAV2 1057 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Olfr834Q7TRG8 312 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Prox2Q8BII1 593 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Znf385bQ8BXJ8 482 aaKnown RBP11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gspt1Q8R050 636 aaKnown RBP11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Iqsec1Q8R0S2 961 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Serpinb9gQ8VHQ1 377 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 9030624G23RikQ9D308 155 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Slco1a4Q9EP96 670 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Dctn3Q9Z0Y1 186 aa11.85□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Slc43a3A2AVZ9 502 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rabgap1A2AWA9 1064 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Armt1A6H630 439 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Flvcr1B2RXV4 560 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gm7995L7N2E4 160 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pold2O35654 469 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Prox1P48437 737 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Sult2a2P50236 285 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gata5P97489 404 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Glt6d1Q2NKH9 311 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Eif2dQ61211 570 aaKnown RBP11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Sox11Q7M6Y2 395 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Olfr1037Q7TR84 321 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pex26Q8BGI5 305 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rsl1d1Q8BVY0 452 aaKnown RBP11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ppp6r2Q8R3Q2 923 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Socs7Q8VHQ2 579 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 FtcdQ91XD4 541 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cnga3Q9JJZ8 631 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gm45233A0A0N4SVE0 221 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Lcn11A2BHR2 178 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Vmn2r27D3YUK6 857 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Hmgb2P30681 210 aaKnown RBP11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Eif3eP60229 445 aaKnown RBP11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ms4a5Q810P8 197 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Epb41l5Q8BGS1 731 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Trmt13Q8BYH3 481 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gtf2a1lQ8R4I4 468 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 L2hgdhQ91YP0 464 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 CmasQ99KK2 432 aaKnown RBP11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Scyl3Q9DBQ7 735 aa11.84□□□□□ -0.51
Ssh1-201ENSMUST00000077689 TgfbiP82198 683 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Lrrc74bQ14BP6 391 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Q3UK37 420 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Sfi1Q3UZY0 1216 aaKnown RBP11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cnpy1Q4VAB4 94 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Nuak1Q641K5 658 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rhbdf1Q6PIX5 856 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Chsy1Q6ZQ11 800 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Btnl1Q7TST0 509 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Yars2Q8BYL4 472 aaKnown RBP11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 PaoxQ8C0L6 504 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 GanQ8CA72 597 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ccdc137Q8R0K4 290 aaKnown RBP11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Fam90a1bQ9D4F3 419 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Bscl2Q9Z2E9 383 aa11.83□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ubr3Q5U430 1889 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Bpifb9bA2AJD1 591 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Ccdc62E9PVD1 701 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Marcksl1P28667 200 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Ido1P28776 407 aaKnown RBP11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 DckP43346 260 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Serpina1cQ00896 412 aa11.83□□□□□ -0.52
Ssh1-201ENSMUST00000077689 Msx2Q03358 267 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms