RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Mageb3Q9D2H4 330 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Stx11Q9D3G5 287 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Smad9Q9JIW5 430 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Prg3Q9JL95 222 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rhox3cA2AWM0 215 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Lrrc73B2RWC4 316 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Olfr414E9Q5P8 317 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm17019K7N6W5 255 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rhox3hL7MU37 215 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tsc22d1P62500 1077 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 S100gP97816 79 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 TraddQ3U0V2 310 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rhox3aQ4TU90 215 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fbxw2Q60584 422 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Usp7Q6A4J8 1103 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 C2cd2lQ80X80 706 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fam227bQ9D518 532 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tjp3Q9QXY1 905 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Net1Q9Z206 595 aa9.64□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Lcn6A2AJB9 181 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ttll9A2APC3 461 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 CtcflA2APF3 636 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 CratP47934 626 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Serpina5P70458 405 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Bcar1Q61140 874 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fam167aQ6P1G6 215 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Spata20Q80YT5 790 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Dyrk4Q8BI55 632 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tubgcp5Q8BKN5 1024 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ndufs3Q9DCT2 263 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gmeb1Q9JL60 562 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tmem59Q9QY73 323 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Grk1Q9WVL4 564 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tll2Q9WVM6 1012 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm3095E9Q058 166 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 PcnaP17918 261 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Marcksl1P28667 200 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pola2P33611 600 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cd86P42082 309 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Il12bP43432 335 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Abi2P62484 446 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Adcy6Q01341 1165 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ifi44Q8BV66 422 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Phc3Q8CHP6 981 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Chaf1bQ9D0N7 572 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Batf3Q9D275 118 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm28897A0A087WP44 222 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Guca1aP43081 202 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Clec4fP70194 548 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 NfiaQ02780 532 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Inf2Q0GNC1 1273 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vars2Q3U2A8 1060 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fam83fQ3UKU4 495 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Deup1Q7M6Y5 601 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zbtb33Q8BN78 671 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zmym6Q8BS54 1249 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 TbcdQ8BYA0 1196 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Jph2Q9ET78 696 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Olig1Q9JKN5 260 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 B3galt4Q9Z0F0 371 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pitpnm2Q6ZPQ6 1335 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cyp4a12bA2A974 508 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm17093F6XGJ4 214 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Bnc1O35914 961 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Kcnu1O54982 1121 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 InvsO89019 1062 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nedd8P29595 81 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Alkbh5Q3TSG4 395 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tex24Q5DP50 351 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cep44Q5HZK1 386 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Orc2Q60862 576 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 GpamQ61586 827 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Klhl31Q8BWA5 634 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cyp4a12aQ91WL5 508 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Depdc7Q91WS7 511 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pwp1Q99LL5 501 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ifrd2Q9D8U0 441 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Prex1Q69ZK0 1650 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Dip2bQ3UH60 1574 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 EXOC1LB9EK06 172 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ap3d1O54774 1199 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Igfbp6P47880 238 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rbm46P86049 533 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zfyve28Q6ZPK7 905 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Lsm8Q6ZWM4 96 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Olfr301Q7TS04 311 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gtf3c4Q8BMQ2 817 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tcaf1Q8BNE1 924 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 BicralQ8CHH5 1074 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Mtif2Q91YJ5 727 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gins4Q99LZ3 223 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Lztr1Q9CQ33 837 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Elp3Q9CZX0 547 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nfu1Q9QZ23 255 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Usp17lbE9Q9U0 468 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Npy5rO70342 466 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 ZfrO88532 1074 aaKnown RBP9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 DcxO88809 366 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 HdcP23738 662 aa9.63□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Prox1P48437 737 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms