RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Rtl9Q32KG4 1339 aa10.24□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Dhx35A2ACQ1 703 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 PotegA5H0M4 473 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Olfr743L7N1Y2 311 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Klc2O88448 599 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 JchainP01592 159 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Dpf3P58269 378 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 IqcmQ149I8 489 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Gngt2Q61017 69 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Gga2Q6P5E6 603 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Pdk1Q8BFP9 434 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Bmp3Q8BHE5 468 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Znf879Q8BI99 563 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Neto2Q8BNJ6 525 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ythdf3Q8BYK6 585 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 MslnlQ8C160 685 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Mcoln2Q8K595 566 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Olfr393Q8VGR6 312 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Nme5Q99MH5 211 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Leng1Q9DB98 261 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rnf14Q9JI90 485 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ssxb9A2BI93 185 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 SelenovD3YXG1 328 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Sstr1P30873 391 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Cd68P31996 326 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Cdh8P97291 799 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Tmem63bQ3TWI9 832 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rufy4Q3TYX8 563 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Dennd1bQ3U1T9 766 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rbm20Q3UQS8 1199 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Khdrbs1Q60749 443 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Usp6nlQ80XC3 819 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 AarsQ8BGQ7 968 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Wdr98Q8VC42 657 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Olfr532Q8VGT4 309 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 F11Q91Y47 624 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Stk33Q924X7 491 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Mzb1Q9D8I1 188 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Nup98Q6PFD9 1816 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Scn9aQ62205 1984 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ms4a14A0A087WSD2 1232 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Wfdc16A2A5H4 111 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Acnat1A2AKK5 416 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Fam71aB7XG49 585 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Stam2O88811 523 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rplp2P99027 115 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Grid1Q61627 1009 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Gramd1bQ80TI0 738 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Tmtc4Q8BG19 741 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Pnma2Q8BHK0 365 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ifi205aQ8CGE8 404 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rftn2Q8CHX7 500 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Prpf39Q8K2Z2 665 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Tlr9Q9EQU3 1032 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Jph2Q9ET78 696 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 PygmQ9WUB3 842 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Mzf1S4R1L6 814 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ism1A2ATD1 454 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rabgap1lA6H6A9 815 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 InaP46660 501 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ephb2P54763 986 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Hddc2Q3SXD3 199 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Soat1Q61263 540 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 HrQ61645 1182 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Atp11bQ6DFW5 1175 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Gpr156Q6PCP7 798 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ddhd1Q80YA3 547 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Kirrel3Q8BR86 778 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Taf2Q8C176 1104 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Prr33Q8C494 260 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Colgalt1Q8K297 617 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Trim7Q923T7 510 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Nsmce1Q9D720 266 aa10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 EtfbQ9DCW4 255 aaKnown RBP10.23□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Xpnpep3B7ZMP1 506 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Gsg1l2M0QWL6 290 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Yme1l1O88967 715 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 ChrngP04760 519 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 AlbP07724 608 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rps6ka3P18654 740 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Slc1a2P43006 572 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ankrd34bQ3UUF8 508 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Nr2c1Q505F1 590 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ksr1Q61097 873 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Six2Q62232 296 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Rps6kc1Q8BLK9 1056 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Trim35Q8C006 501 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 HpdlQ8K248 371 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 LzicQ8K3C3 190 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Polr3hQ9D2C6 204 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Akr1e2Q9DCT1 301 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Lrrc73B2RWC4 316 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Vmn2r1O70410 912 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Ap2a2P17427 938 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Pkn1P70268 946 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Q3KNL4 93 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Arhgap1Q5FWK3 439 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Tmem199Q5SYH2 208 aa10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Orc2Q60862 576 aaKnown RBP10.22□□□□□ -0.77
Cpsf1-201ENSMUST00000071898 Cpa1Q7TPZ8 419 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms