RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gpsm3Q3U1Z5 159 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cfhr2Q4LDF6 332 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 IqceQ6PCQ0 778 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gpr20Q8BYC4 358 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr397Q8VEZ6 315 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Socs4Q91ZA6 436 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fgd4Q91ZT5 766 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pacsin3Q99JB8 424 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Psmd9Q9CR00 222 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Nde1Q9CZA6 344 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Limd1Q9QXD8 668 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Kcnd2Q9Z0V2 630 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Rtl9Q32KG4 1339 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr391-psA0A0U1RNJ4 312 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mageb4A2A9R3 556 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Svs3aF2Z472 265 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr611K7N609 323 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr612L7N462 323 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 StrnO55106 780 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Myl1P05977 188 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 RalgdsQ03385 852 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Nab1Q61122 486 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Chi3l1Q61362 389 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ubap2lQ80X50 1107 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Spata20Q80YT5 790 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Slc9a4Q8BUE1 797 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Svs3bQ8BZH8 265 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ppm1fQ8CGA0 452 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Irak3Q8K4B2 609 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Coq6Q8R1S0 476 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 CoprsQ9CQ13 173 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 GOLGA7BQ9D428 167 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ggps1Q9WTN0 300 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ClcnkbQ9WUB6 687 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ism2D3Z6A3 493 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tnfrsf11bO08712 401 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 L1camP11627 1260 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Hoxc10P31257 342 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Slc38a5Q3U1J0 479 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 1810049J17RikQ3V2G9 153 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 CttnQ60598 546 aaKnown RBP10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PapolaQ61183 739 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Nemp1Q6ZQE4 437 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr392Q7TRX6 312 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Moxd2Q7TT41 619 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pcmtd2Q8BHD8 359 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pex19Q8VCI5 299 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PompQ9CQT5 141 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Krt7Q9DCV7 457 aa10.13□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Dhtkd1A2ATU0 921 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cyp2a22B2RXZ2 492 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Foxm1O08696 760 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pik3r2O08908 722 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fgl2P12804 432 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fmo3P97501 534 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Grm1P97772 1199 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fam198aQ3UY90 562 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Srrm1Q52KI8 946 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tmem45aQ60774 273 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mysm1Q69Z66 819 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Scaf4Q6PFF0 1209 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Enpp4Q8BTJ4 456 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Trim61Q8JZK6 461 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Colgalt1Q8K297 617 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Zcchc18Q8VD24 393 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ascc2Q91WR3 749 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ugp2Q91ZJ5 508 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tas1r1Q99PG6 842 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Paip2Q9D6V8 124 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ParvbQ9ES46 365 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr271-ps1A0A1L1SQH2 283 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Zbed6D2EAC2 980 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 D3Z070 196 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mroh4G3X8W1 983 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Magea6O89010 325 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ItgalP24063 1163 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Matn1P51942 500 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 NcstnP57716 708 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pdcd1Q02242 288 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Marveld2Q3UZP0 555 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Esyt3Q5DTI8 891 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fcrl5Q68SN8 596 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Rad54bQ6PFE3 886 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Rmnd1Q8CI78 450 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Commd8Q9CZG3 183 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Scn1aA2APX8 2009 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Arhgef37A1IGU4 676 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gm1141B9EJU1 475 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Hcn2O88703 863 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mtco1P00397 514 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Prdx5P99029 210 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PrkcqQ02111 707 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 TchpQ3TVW5 497 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Hace1Q3U0D9 909 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Traf3Q60803 567 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Slc26a2Q62273 739 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ankrd6Q69ZU8 712 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Supt20hQ7TT00 530 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Lyve1Q8BHC0 318 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pum3Q8BKS9 647 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms