RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 TbcdQ8BYA0 1196 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Onecut3Q8K557 490 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 NgrnQ99KS2 293 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mxra8Q9DBV4 442 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Capn10Q9ESK3 666 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pcna-ps2A0A140T8V5 261 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 AF366264G3X9P9 502 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gsg1l2M0QWL6 290 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 DcxO88809 366 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 PcnaP17918 261 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Akr1c6P70694 323 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Agxt2Q3UEG6 513 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ythdf3Q8BYK6 585 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Washc5Q8C2E7 1159 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rprd1aQ8VDS4 312 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Serbp1Q9CY58 407 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 GarsQ9CZD3 729 aaKnown RBP12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ddit4Q9D3F7 229 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gid8Q9D7M1 228 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gtf3c6Q9D8P7 227 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tagln3Q9R1Q8 199 aa12.87□□□□□ -0.35
Sdf4-201ENSMUST00000050078 JchainP01592 159 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rps12P63323 132 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Armc7Q3UJZ3 198 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Fam91a1Q3UVG3 837 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 C2cd2lQ80X80 706 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 TbcelQ8C5W3 424 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mamdc2Q8CG85 686 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 HnrnprQ8VHM5 632 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cyp2c70Q91W64 489 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 4930519G04RikQ9CPT7 205 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ears2Q9CXJ1 523 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Net1Q9Z206 595 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 NktrP30415 1453 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 2210016F16RikG3X8U3 338 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ap3d1O54774 1199 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Vcam1P29533 739 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gtf2bP62915 316 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Calb2Q08331 271 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 RasefQ5RI75 627 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Scube3Q66PY1 993 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Vps50Q8CI71 964 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Guca1bQ8VBV8 201 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ubxn6Q99PL6 442 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Drg2Q9QXB9 364 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Trpc7Q9WVC5 862 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Kcnd2Q9Z0V2 630 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Fbxl18E9PYR1 771 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 FancfE9Q5Z5 343 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rpl21O09167 160 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rdh7O88451 316 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Klhdc9Q3USL1 350 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Orc2Q60862 576 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Arl13bQ640N2 427 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Best3Q6H1V1 669 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tas2r125Q7M710 311 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 4921511C20RikQ8BVT7 469 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Il31raQ8K5B1 716 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 IntS13Q8QZV7 732 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Nmd3Q99L48 503 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Q9CR55 154 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 HemgnQ9ERZ0 503 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ice1E9Q286 2241 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Srsf11E9Q6E5 511 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Kifc3O35231 824 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Pde8aO88502 823 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 BtkP35991 659 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tbc1d10aP58802 500 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zfp943Q6NZP4 507 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Olfr23Q7TRX4 325 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Zdhhc14Q8BQQ1 489 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Taf2Q8C176 1104 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Vangl2Q91ZD4 521 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Kdelr1Q99JH8 212 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ggt7Q99JP7 662 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ino80bQ99PT3 375 aaKnown RBP12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Ndufaf7Q9CWG8 436 aa12.86□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rhox3cA2AWM0 215 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Erich1E9PY43 332 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rhox3hL7MU37 215 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Apoa4P06728 395 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 EpoP07321 192 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cyp2c37P56654 490 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Plk1Q07832 603 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Armcx5Q3UZB0 606 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rhox3aQ4TU90 215 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Myo1dQ5SYD0 1006 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 ThtpaQ8JZL3 224 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Tmprss4Q8VCA5 435 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Mta3Q924K8 591 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Klhdc7aA2APT9 773 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Magea4F2Z493 315 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Prl6a1O35257 230 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 AlbP07724 608 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Cd19P25918 547 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Aqp1Q02013 269 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 CamkvQ3UHL1 512 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Plcl1Q3USB7 1096 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Gstt2Q61133 244 aa12.85□□□□□ -0.35
Sdf4-201ENSMUST00000050078 Rbm12b1Q80YR9 836 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms