RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cul3Q9JLV5 768 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Psme4Q5SSW2 1843 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Serpinb3cA2RSF9 386 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Kif6E9PX57 802 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm3415J3QMS8 315 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Fen1P39749 378 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ckap2lQ7TS74 745 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Smndc1Q8BGT7 238 aaKnown RBP13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Thnsl1Q8BH55 747 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Pi4kbQ8BKC8 816 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Akr1c14Q91WT7 323 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Pacsin3Q99JB8 424 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 CoprsQ9CQ13 173 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 QpctQ9CYK2 362 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Trim42Q9D2H5 723 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm3404Q9D506 307 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 IcmtQ9EQK7 283 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Cpsf3Q9QXK7 684 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 RpgrQ9R0X5 1001 aa13.9□□□□□ -0.18
Nup88-201ENSMUST00000035283 Cacna1fQ9JIS7 1985 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Smok3cA0A087WSF2 504 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 0610012G03RikA0A0J9YTR2 95 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Adamts6D3Z1A5 1117 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Kifc5bE9PUA5 672 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 GclmO09172 274 aaKnown RBP13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Il1rapl1P59823 695 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Kcna2P63141 499 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Nxpe4Q52KP5 543 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Klra8Q60682 266 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pde1aQ61481 565 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ankrd6Q69ZU8 712 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Rsl1d1Q8BVY0 452 aaKnown RBP13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Kctd15Q8K0E1 283 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Eva1bQ8K2Y3 164 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 FtcdQ91XD4 541 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Trps1Q925H1 1281 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Smyd3Q9CWR2 428 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Commd8Q9CZG3 183 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 B4galt5Q9JMK0 388 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Msh5Q9QUM7 833 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 TfebQ9R210 475 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Sned1Q70E20 1403 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 StrcQ8VIM6 1809 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Cyp2j6O54750 501 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Cd2P08920 344 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Prom2Q3UUY6 835 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Foxn1Q61575 648 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Arl13bQ640N2 427 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Plppr4Q7TME0 766 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pcmtd2Q8BHD8 359 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Q8BHN7 327 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Washc5Q8C2E7 1159 aaKnown RBP13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Panx3Q8CEG0 392 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Lamtor4Q8CF66 99 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Taco1Q8K0Z7 294 aaKnown RBP13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ablim1Q8K4G5 861 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Slc35f5Q8R314 524 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mcrs1Q99L90 462 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 MlklQ9D2Y4 472 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Dmap1Q9JI44 468 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Magel2Q9QZ04 1284 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mtm1Q9Z2C5 603 aa13.89□□□□□ -0.19
Nup88-201ENSMUST00000035283 Apol11aE9PZG0 334 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Hsd17b14E9Q3D4 273 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 AlpiF8VPQ6 554 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Olfr611K7N609 323 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Olfr612L7N462 323 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Prkg1P0C605 671 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Shmt1P50431 478 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mark2Q05512 776 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Cfhr2Q4LDF6 332 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Brsk2Q69Z98 735 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ap3m2Q8R2R9 418 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pcdh18Q8VHR0 1134 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ubap2Q91VX2 1132 aaKnown RBP13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Chst12Q99LL3 419 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 GsdmcQ99NB5 468 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Rab27aQ9ERI2 221 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tmem59Q9QY73 323 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tle6Q9WVB3 581 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Megf6Q80V70 1572 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ptpn3A2ALK8 913 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ptpn11P35235 597 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ezh1P70351 747 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mrgprx2Q3UG50 352 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 CttnQ60598 546 aaKnown RBP13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Chi3l1Q61362 389 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Htr1aQ64264 421 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Fcrl5Q68SN8 596 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Scube1Q6NZL8 1018 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Got1l1Q7TSV6 404 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Echs1Q8BH95 290 aaKnown RBP13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Lyve1Q8BHC0 318 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Dars2Q8BIP0 653 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ints6lQ8BND4 861 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Olfr784Q8VFZ9 319 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Olfr385Q8VGT1 312 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Trim66Q924W6 1242 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ttc30a1Q99J38 664 aa13.88□□□□□ -0.19
Nup88-201ENSMUST00000035283 Med7Q9CZB6 233 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms