RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Bfsp2Q6NVD9 416 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 PoliQ6R3M4 717 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rfx4Q7TNK1 735 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tcaf1Q8BNE1 924 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ildr1Q8CBR1 537 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn1r203Q8R273 311 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Trim12aQ99PQ1 284 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sapcd2Q9D818 391 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gbp11A9YVJ5 442 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kcnu1O54982 1121 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 4930430A15RikQ05AC5 485 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mcm9Q2KHI9 1134 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc26a2Q62273 739 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Q8BGN9 141 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tdp1Q8BJ37 609 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tmem260Q8BMD6 703 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Grik4Q8BMF5 956 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Svs3bQ8BZH8 265 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Setdb2Q8C267 713 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Shisa4Q8CA71 197 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cog4Q8R1U1 785 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Asb11Q9CQ31 323 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ndc80Q9D0F1 642 aaKnown RBP10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Maged1Q9QYH6 775 aaKnown RBP10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr1354E9Q5G9 310 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm5689F6Y2A6 97 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 GaaP70699 953 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fam83hQ148V8 1209 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cul4aQ3TCH7 759 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Xpo1Q6P5F9 1071 aaKnown RBP10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gucy2gQ6TL19 1100 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Hspa13Q8BM72 471 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 HpdlQ8K248 371 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tesk2Q8VCT9 570 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Spata9Q9D9R3 252 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sertad2Q9JJG5 309 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pdpk1Q9Z2A0 559 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Smok3aC0HKC8 504 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Smok3bC0HKC9 504 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tmigd3G3X8R9 209 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zfy2P20662 777 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Krt6aP50446 553 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Uchl4P58321 233 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tbc1d10aP58802 500 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Adrbk2Q3UYH7 688 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ripor1Q68FE6 1223 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zfp943Q6NZP4 507 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Elmo2Q8BHL5 732 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zbtb44Q8R0A2 453 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cadm1Q8R5M8 456 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 AmotQ8VHG2 1126 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Agap3Q8VHH5 910 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Nme5Q99MH5 211 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ubxn6Q99PL6 442 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 NvlQ9DBY8 855 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 AllcQ9JHX6 414 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Smim10l2aA0A0B4J1F8 78 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Atp8b5A3FIN4 1183 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gspt2Q149F3 632 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Grm2Q14BI2 872 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Proser1Q5PRE5 913 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Flot2Q60634 428 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sdf4Q61112 361 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 E2f5Q61502 335 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc13a5Q67BT3 572 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 R3hdm2Q80TM6 1044 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 RubcnQ80U62 956 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Armc12Q80X86 340 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kct2Q8K201 259 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pcdha11Q91Y19 950 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Stk33Q924X7 491 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olig1Q9JKN5 260 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vav3Q9R0C8 847 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ror1Q9Z139 937 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm2832F7AEC7 200 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 AlbP07724 608 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Anxa5P48036 319 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Epas1P97481 874 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Znf112Q0VAW7 879 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Q3UK37 420 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Myo1dQ5SYD0 1006 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Foxn1Q61575 648 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Utp14bQ6EJB6 756 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccdc32Q8BS39 179 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zfp446Q8C9M8 523 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn1r64Q8R2B8 320 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 RnpepQ8VCT3 650 aaKnown RBP10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 NcaldQ91X97 193 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 MutyhQ99P21 515 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lpin2Q99PI5 893 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Arhgef25Q9CWR0 618 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Maged2Q9ER67 616 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cry2Q9R194 592 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Efcab12V9GXH0 673 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lzts3A2AHG0 700 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rrn3B2RS91 656 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CenpaO35216 134 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cyp2c39P56656 490 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sdr16c6Q05A13 316 aa10.22□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Spryd7Q3TFQ1 196 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms