RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 JchainP01592 159 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pgk2P09041 417 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pdcd2P46718 343 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lrrn4P59383 733 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pcbp1P60335 356 aaKnown RBP13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rasgrf2P70392 1189 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Muc1Q02496 630 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Snx25Q3ZT31 840 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Elf1Q60775 612 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Smg5Q6ZPY2 1017 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Stambpl1Q76N33 436 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fam49aQ8BHZ0 323 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccdc68Q8BVC4 333 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc36a1Q8K4D3 475 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gga1Q8R0H9 635 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PdgfdQ925I7 370 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Raver1Q9CW46 748 aaKnown RBP13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rsph3bQ9DA80 389 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Hao1Q9WU19 370 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm5538W4VSP6 401 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pcdh7A0A0A6YY83 1255 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm7694J3QNH8 270 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Spin2fJ3QPU0 254 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 LgmnO89017 435 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Arhgap45Q3TBD2 1116 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rnf157Q3TEL6 685 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc5a10Q5SWY8 596 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Phc1Q64028 1012 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 ItpkcQ7TS72 678 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Q8BHN7 327 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Exoc3l1Q8BI71 739 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rfx6Q8C7R7 927 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 TgdsQ8VDR7 355 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Dnajc9Q91WN1 259 aaKnown RBP13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Drc3Q9D5E4 523 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cpxm1Q9Z100 722 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Bub1bQ9Z1S0 1052 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Crlf3Q9Z2L7 442 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Dennd4aE9Q8V6 1869 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Wfdc16A2A5H4 111 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zfp651E9PZ11 729 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zfp850J3QPC5 689 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Kcnj6P48542 425 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Nploc4P60670 608 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Papd5Q68ED3 633 aaKnown RBP13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Arl5cQ6P068 179 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Stk38lQ7TSE6 464 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zbtb44Q8R0A2 453 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Evi2bQ8VD58 444 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfr615Q8VGY4 313 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 FdpsQ920E5 353 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Q9CPS8 106 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tex9Q9D845 387 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 MycsQ9Z304 431 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Plxna1P70206 1894 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Trpm7Q923J1 1863 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gucy2dA0A0U1RPR8 1117 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Smok3aC0HKC8 504 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Smok3bC0HKC9 504 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 FaahO08914 579 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Aimp1P31230 310 aaKnown RBP13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmprss15P97435 1069 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cntn3Q07409 1028 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pdss1Q33DR2 409 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmem65Q4VAE3 234 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Armcx2Q6A058 784 aaKnown RBP13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 C6.1alQ7M757 291 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfr1505Q7TQQ2 316 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfr389Q7TRX7 312 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Q8BGA7 448 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pak5Q8C015 719 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Elp3Q9CZX0 547 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pgm1Q9D0F9 562 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Spata9Q9D9R3 252 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ropn1Q9ESG2 212 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mpp5Q9JLB2 675 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cib2Q9Z309 187 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Adgra2Q91ZV8 1336 aa13.16□□□□□ -0.3
Rnf4-201ENSMUST00000030992 2010300C02RikE9Q3M9 1175 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 DldO08749 509 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 TxnP10639 105 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Serpinb2P12388 415 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fmo3P97501 534 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Glt6d1Q2NKH9 311 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pabpn1lQ5XFR0 273 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gstt2Q61133 244 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Arhgef18Q6P9R4 1021 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Prrt3Q6PE13 971 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zfp62Q8C827 914 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 GldcQ91W43 1025 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 NamptQ99KQ4 491 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Nt5c3aQ9D020 331 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 MrgbpQ9DAT2 204 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmod3Q9JHJ0 352 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gabbr1Q9WV18 960 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfr271-ps1A0A1L1SQH2 283 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm10720D3Z1I5 223 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Akap1O08715 857 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Eef1bO70251 225 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfm3P63056 478 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms