RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Slc2a4P14142 509 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PctpP53808 214 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Armc7Q3UJZ3 198 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Traf3Q60803 567 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zswim5Q80TC6 1188 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Plekha8Q80W71 519 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn1r64Q8R2B8 320 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Stard13Q923Q2 1113 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rfc4Q99J62 364 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tada1Q99LM9 335 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mageb3Q9D2H4 330 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ggps1Q9WTN0 300 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Morc1Q9WVL5 950 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rhbdl2A2AGA4 302 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pdia2D3Z6P0 527 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm3739L7N296 216 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ptch2O35595 1182 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mbl1P39039 239 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Q3U4G0 281 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm10392Q3V3I3 114 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zfyve28Q6ZPK7 905 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dhx33Q80VY9 698 aaKnown RBP10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pcdha11Q91Y19 950 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gins4Q99LZ3 223 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rnf135Q9CWS1 417 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kcnh4A2A5F7 1018 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gnrh1P13562 90 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 HrQ61645 1182 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Phf21aQ6ZPK0 659 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 NlnQ91YP2 704 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gprc5bQ923Z0 410 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 4930513O06RikQ9D549 161 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Klrc2Q9WTJ9 238 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Bcat1P24288 386 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Adam6bQ6IMH7 756 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 TdrkhQ80VL1 560 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 TbcdQ8BYA0 1196 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Lpgat1Q91YX5 370 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pgam1Q9DBJ1 254 aa10.43□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Armt1A6H630 439 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm6408J3QNG1 320 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CamkvQ3UHL1 512 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Myl6Q60605 151 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 MyocdQ8VIM5 935 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hipk3Q9ERH7 1192 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rreb1Q3UH06 1700 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm17093F6XGJ4 214 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cyp2d34L7N463 504 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ebf2O08792 575 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AmacrO09174 381 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Btbd3P58545 530 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Aqp1Q02013 269 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Magee2Q52KG3 523 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gja6Q6S5G4 283 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hmgxb4Q80Y32 594 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 IlkapQ8R0F6 392 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PurbO35295 324 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dsg3O35902 993 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nptx2O70340 429 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mapk1P63085 358 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rps6ka6Q7TPS0 764 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atxn2lQ7TQH0 1049 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 4930579F01RikE9Q3L6 325 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AfpP02772 605 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tal1P22091 329 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Anxa5P48036 319 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 S100gP97816 79 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 PrlrQ08501 608 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 SpoplQ2M2N2 392 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Agxt2Q3UEG6 513 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pla2g4dQ50L43 825 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ifi47Q61635 420 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Bhlhe22Q8C6A8 355 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Acsm2Q8K0L3 575 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pdia6Q922R8 440 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ssu72Q9CY97 194 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atf6F6VAN0 656 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm3755K7N743 167 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CnpP16330 420 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CartptP56388 129 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Shox2P70390 331 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nutm2Q3V0C3 733 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Syn2Q64332 586 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Scube1Q6NZL8 1018 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr798Q7TRH8 311 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Arhgef19Q8BWA8 802 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 BroxQ8K2Q7 411 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ubxn6Q99PL6 442 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 XpotQ9CRT8 963 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AuhQ9JLZ3 314 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc2a5Q9WV38 501 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pdcd11Q6NS46 1862 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm340F6RGI3 1242 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Nfkb1P25799 971 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr295Q7TS08 309 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mrps26Q80ZS3 200 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Thoc5Q8BKT7 683 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 H2afy2Q8CCK0 372 aaKnown RBP10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 TrabdQ99JY4 376 aa10.42□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sv2aQ9JIS5 742 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms