RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DAB1O75553 588 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TJP3O95049 919 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 USP17L7P0C7H9 530 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CPB1P15086 417 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CYP2F1P24903 491 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 IL1R2P27930 398 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 PCK1P35558 622 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 SCNN1AP37088 669 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 RPL34P49207 117 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 IRAK1P51617 712 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CDH6P55285 790 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 COPS2P61201 443 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 YWHAZP63104 245 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 MRPS5P82675 430 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 SLC25A11Q02978 314 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 RAB6CQ53S08 254 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 DCAF6Q58WW2 860 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 DNAJC21Q5F1R6 531 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CCDC137Q6PK04 289 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 GPRIN1Q7Z2K8 1008 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TMCO2Q7Z6W1 182 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 RFX6Q8HWS3 928 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 ARFGAP1Q8N6T3 406 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 PRELID2Q8N945 189 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 RAPGEF5Q92565 580 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CCDC114Q96M63 670 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 PGLYRP2Q96PD5 576 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CALN1Q9BXU9 219 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 MAK16Q9BXY0 300 aaKnown RBP9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TXLNGYQ9BZA5 131 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 GPR62Q9BZJ7 368 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TRIM31Q9BZY9 425 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 ZCWPW1Q9H0M4 648 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 RAB6CQ9H0N0 254 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 DPH5Q9H2P9 285 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 TMBIM4Q9HC24 238 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 CNGB3Q9NQW8 809 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 MARCH5Q9NX47 278 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 STAP1Q9ULZ2 295 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 PCDHB5Q9Y5E4 795 aa9.24□□□□□ -0.93
PHGDH-219ENST00000641513 PLXNA4Q9HCM2 1894 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ESYT3A0FGR9 886 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ZSCAN5CA6NGD5 496 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 OR6C75A6NL08 312 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 H0YGN5 161 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DGKIO75912 1065 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 OAZ2O95190 189 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ZBED1O96006 694 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 NUDT17P0C025 328 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 EN2P19622 333 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 NR1D1P20393 614 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 FGFR3P22607 806 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 KDELR1P24390 212 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ITGB8P26012 769 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 NOS2P35228 1153 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 COILP38432 576 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 MATKP42679 507 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 PTPN9P43378 593 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 KCNJ1P48048 391 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 FNTAP49354 379 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DAOAP59103 153 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DYNLT1P63172 113 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DEFB103AP81534 67 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ADCY1Q08828 1119 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 BTG3Q14201 252 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 PPP1R7Q15435 360 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 NFE2Q16621 373 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 KCTD19Q17RG1 926 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TFDP3Q5H9I0 405 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DUPD1Q68J44 220 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 MFSD5Q6N075 450 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 KIAA1841Q6NSI8 718 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 HFE2Q6ZVN8 426 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 SYDE1Q6ZW31 735 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 B4GALNT4Q76KP1 1039 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TMC3Q7Z5M5 1100 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 RIN2Q8WYP3 895 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 HAUS1Q96CS2 278 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 PEBP4Q96S96 227 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TBCBQ99426 244 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 PKMYT1Q99640 499 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 FAM118BQ9BPY3 351 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 ERP44Q9BS26 406 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 HERPUD2Q9BSE4 406 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TRIM51Q9BSJ1 452 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DDX23Q9BUQ8 820 aaKnown RBP9.23□□□□□ -0.93
PHGDH-219ENST00000641513 TMEM109Q9BVC6 243 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 DCLK3Q9C098 648 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 HOMER3Q9NSC5 361 aa9.23□□□□□ -0.93
PHGDH-219ENST00000641513 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms