RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 ITGB3P05106 788 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 P4HA1P13674 534 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TCP1P17987 556 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 ABCB4P21439 1286 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 GNA15P30679 374 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 RBP5P82980 135 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 SATB1Q01826 763 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 CKAP4Q07065 602 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 DMWDQ09019 674 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 DUSP4Q13115 394 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TRIM72Q6ZMU5 477 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 RHOT2Q8IXI1 618 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 TMEM209Q96SK2 561 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 ACP6Q9NPH0 428 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 DPP3Q9NY33 737 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
ERGIC3-220ENST00000640748 XPOTO43592 962 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 TADA3O75528 432 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SOAT2O75908 522 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 CYP3A5P20815 502 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 HOXC13P31276 330 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SOX9P48436 509 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 CCR3P51677 355 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 TUBB4BP68371 445 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 LMNB2Q03252 620 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 GPR17Q13304 367 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 TCEAL1Q15170 157 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 LPAL2Q16609 132 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SCARA3Q6AZY7 606 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 TXNDC11Q6PKC3 985 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SCARA5Q6ZMJ2 495 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 GAREM2Q75VX8 874 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SLC35G2Q8TBE7 412 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 GOLGA1Q92805 767 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 THAP2Q9H0W7 228 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 CISHQ9NSE2 258 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 NXF1Q9UBU9 619 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 SLC27A5Q9Y2P5 690 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 CACNA1BQ00975 2339 aa12.53□□□□□ -0.4
ERGIC3-220ENST00000640748 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CTAGE15A4D2H0 777 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 MTMR11A4FU01 709 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 OR6C75A6NL08 312 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 SLC38A8A6NNN8 435 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 K7ESF4 209 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CHADO15335 359 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 THAP12O43422 761 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 HRO43593 1189 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CTAGE8P0CG41 777 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CD58P19256 250 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 TYMPP19971 482 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 ASPAP45381 313 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CXCL12P48061 93 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 ZNF132P52740 706 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 NRLP54845 237 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 Q6ZS52 159 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CTAGE6Q86UF2 777 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 ARID3BQ8IVW6 561 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CTAGE4Q8IX94 777 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CXorf38Q8TB03 319 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 UBXN4Q92575 508 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 TRIM11Q96F44 468 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 OXCT2Q9BYC2 517 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 SLITRK6Q9H5Y7 841 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 USP18Q9UMW8 372 aa12.52□□□□□ -0.41
ERGIC3-220ENST00000640748 SCN1AP35498 2009 aa12.51□□□□□ -0.41
ERGIC3-220ENST00000640748 MYBPHLA2RUH7 354 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms