RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 NR2C2APQ86WQ0 139 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 NR4A3Q92570 626 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 HIC2Q96JB3 615 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 MEIS3Q99687 375 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 TRIM54Q9BYV2 358 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 TRIM5Q9C035 493 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 MYLK2Q9H1R3 596 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 USP29Q9HBJ7 922 aa4.25□□□□□ -1.73
AP3S1-209ENST00000640413 A0A1W2PPC1 479 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 EXOC5O00471 708 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 RASAL1O95294 804 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 NPR1P16066 1061 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 ARFIP2P53365 341 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 RAB1AP62820 205 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 GFI1BQ5VTD9 330 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 CACHD1Q5VU97 1274 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 TMPRSS12Q86WS5 348 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 GRAMD1CQ8IYS0 662 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 TMEM199Q8N511 208 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 ARHGAP39Q9C0H5 1083 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 DECR2Q9NUI1 292 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 CDY1Q9Y6F8 540 aa4.24□□□□□ -1.73
AP3S1-209ENST00000640413 WASHC2CQ9Y4E1 1318 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 AGPSO00116 658 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 CD3EAPO15446 510 aaKnown RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 RGS10O43665 173 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 HGFP14210 728 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 HOXB2P14652 356 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 HOXA11P31270 313 aaPredicted RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 ALDH7A1P49419 539 aaKnown RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 PGGT1BP53609 377 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 SLC13A2Q13183 592 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 TMEM240Q5SV17 173 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 ATG9BQ674R7 924 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 GSG1LQ6UXU4 331 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 FAM57BQ71RH2 274 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 FBXL14Q8N1E6 418 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 PRPF38AQ8NAV1 312 aaKnown RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 OR6B3Q8NGW1 331 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 NUDCD2Q8WVJ2 157 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 KBTBD7Q8WVZ9 684 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 NEUROG1Q92886 237 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 HPS3Q969F9 1004 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 NT5C1BQ96P26 610 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 MAP3K14Q99558 947 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 ASPSCR1Q9BZE9 553 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 NUAK2Q9H093 628 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 DNMT3BQ9UBC3 853 aaKnown RBP4.23□□□□□ -1.73
AP3S1-209ENST00000640413 PCDHA12Q9UN75 941 aa4.23□□□□□ -1.73
AP3S1-209ENST00000640413 TRIP12Q14669 1992 aaPredicted RBP4.22□□□□□ -1.73
AP3S1-209ENST00000640413 A0A088AWK7 358 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 TLX3O43711 291 aaPredicted RBP4.22□□□□□ -1.73
AP3S1-209ENST00000640413 TBC1D4O60343 1298 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 AKAP5P24588 427 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 ITGA8P53708 1063 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 P2RX3P56373 397 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 GPC5P78333 572 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 TIAL1Q01085 375 aaKnown RBP eCLIP4.22□□□□□ -1.73
AP3S1-209ENST00000640413 NFATC4Q14934 902 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 C9orf50Q5SZB4 431 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 CUZD1Q86UP6 607 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 METTL25Q8N6Q8 603 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 WFIKKN2Q8TEU8 576 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 MIB2Q96AX9 1013 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 NTPCRQ9BSD7 190 aaKnown RBP4.22□□□□□ -1.73
AP3S1-209ENST00000640413 SMURF2Q9HAU4 748 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 AGO4Q9HCK5 861 aaKnown RBP4.22□□□□□ -1.73
AP3S1-209ENST00000640413 ARL8BQ9NVJ2 186 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 FZD4Q9ULV1 537 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 SPEF1Q9Y4P9 236 aa4.22□□□□□ -1.73
AP3S1-209ENST00000640413 SLC22A23A1A5C7 686 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 PRAMEF2O60811 474 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 KITP10721 976 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 HOXA7P31268 230 aaPredicted RBP4.21□□□□□ -1.74
AP3S1-209ENST00000640413 GATMP50440 423 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 AMPD3Q01432 767 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 PTGR1Q14914 329 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 NUGGCQ68CJ6 796 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 TFAP2DQ7Z6R9 452 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 C11orf44Q8N8P7 122 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 ATP2A3Q93084 1043 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 MED30Q96HR3 178 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 SLITRK1Q96PX8 696 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 FCRL5Q96RD9 977 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 DPH1Q9BZG8 443 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 TRIM36Q9NQ86 728 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 XPNPEP3Q9NQH7 507 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 GJB4Q9NTQ9 266 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 LUC7L2Q9Y383 392 aaKnown RBP4.21□□□□□ -1.74
AP3S1-209ENST00000640413 CADPSQ9ULU8 1353 aa4.21□□□□□ -1.74
AP3S1-209ENST00000640413 A0A087WYN8 130 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 C16orf96A6NNT2 1141 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 ALG1L2C9J202 215 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 H7C4K7 107 aa4.2□□□□□ -1.74
AP3S1-209ENST00000640413 ACOT8O14734 319 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms