RNA–Protein interactions for RNA: ENST00000638086.1

GRAMD1B-215, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-215ENST00000638086 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 ART4Q93070 314 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 ZNF212Q9UDV6 495 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 VAV1P15498 845 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 CBX3Q13185 183 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 TMEM132DQ14C87 1099 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 CCDC137Q6PK04 289 aaKnown RBP13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 NT5DC4Q86YG4 428 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 SLC35G2Q8TBE7 412 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 RAET1EQ8TD07 263 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 ALG3Q92685 438 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 ARHGEF26Q96DR7 871 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 SNX27Q96L92 541 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 PTPN22Q9Y2R2 807 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 PCDHB4Q9Y5E5 795 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
GRAMD1B-215ENST00000638086 FAM170AA1A519 330 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 YY1P25490 414 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 UBXN11Q5T124 520 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 C10orf82Q8WW14 230 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 THAP2Q9H0W7 228 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 PLEKHA5Q9HAU0 1116 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 IL1RAPL1Q9NZN1 696 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ITGB3P05106 788 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ABCB4P21439 1286 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 SERPINB3P29508 390 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 WDR60Q8WVS4 1066 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 MPP4Q96JB8 637 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
GRAMD1B-215ENST00000638086 A0A0J9YVX5 310 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 TMEM221A6NGB7 291 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 HPCAP84074 193 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 MGAT3Q09327 533 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 ALKAL1Q6UXT8 129 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 IZUMO2Q6UXV1 221 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 SENP6Q9GZR1 1112 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 SAGE1Q9NXZ1 904 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 DERAQ9Y315 318 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 HES2Q9Y543 173 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 HNRNPCL1O60812 293 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CCDC22O60826 627 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 FKTNO75072 461 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 INHAP05111 366 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CLUL1Q15846 466 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 NMD3Q96D46 503 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 BTBD10Q9BSF8 475 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 SAR1AQ9NR31 198 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 FAM47DPA6NHR8 397 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 GSC2O15499 205 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 RECQL4O94761 1208 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 CHRNA1P02708 482 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 KRT19P08727 400 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 UNGP13051 313 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 GNA15P30679 374 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 ATICP31939 592 aa13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
GRAMD1B-215ENST00000638086 DSG1Q02413 1049 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms