RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 IFNAR2P48551 515 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 ZNF75DP51815 510 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 SIM2Q14190 667 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 DMC1Q14565 340 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 CCDC6Q16204 474 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 DPCR1Q3MIW9 517 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 RAB41Q5JT25 222 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 HECTD3Q5T447 861 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 ZNF658Q5TYW1 1059 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 LAIR1Q6GTX8 287 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 TTI2Q6NXR4 508 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 Q6ZNB5 142 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 PRR23BQ6ZRT6 265 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 SYT13Q7L8C5 426 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 RASSF3Q86WH2 238 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 DHX40Q8IX18 779 aaKnown RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 CPA6Q8N4T0 437 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 IL17RCQ8NAC3 791 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 MLKLQ8NB16 471 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 OVCA2Q8WZ82 227 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 SLC35C1Q96A29 364 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 CYFIP2Q96F07 1278 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 TNIP3Q96KP6 325 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 MED10Q9BTT4 135 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 NIF3L1Q9GZT8 377 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 DUSP15Q9H1R2 295 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 CYP3A43Q9HB55 503 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 SCML2Q9UQR0 700 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 ZKSCAN5Q9Y2L8 839 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 R3HCC1Q9Y3T6 440 aaKnown RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 CCDC163A0A0D9SF12 145 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 E2F8A0AVK6 867 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 TM4SF5O14894 197 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 AP5Z1O43299 807 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 TLR5O60602 858 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 RETP07949 1114 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 CISD3P0C7P0 127 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 ACO1P21399 889 aaKnown RBP8.27□□□□□ -1.09
PNKP-229ENST00000637897 BCKDHBP21953 392 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 GTF2H1P32780 548 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 CLCN1P35523 988 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 TUBP50607 506 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 NRLP54845 237 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 SEC13P55735 322 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 PLK5Q496M5 336 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 C2orf27AQ580R0 203 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 ARHGAP17Q68EM7 881 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 KRT39Q6A163 491 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 TOGARAM2Q6ZUX3 1019 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 HTR3DQ70Z44 454 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 CCDC33Q8N5R6 958 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 NAT16Q8N8M0 369 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 OLIG1Q8TAK6 271 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 GAB3Q8WWW8 586 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 TFAP2BQ92481 460 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 MRFAP1L1Q96HT8 127 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 SLITRK1Q96PX8 696 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 GSDMAQ96QA5 445 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 ACOX2Q99424 681 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 DUSP16Q9BY84 665 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 CISHQ9NSE2 258 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 SEMA4GQ9NTN9 838 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
PNKP-229ENST00000637897 COMMD8Q9NX08 183 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 RAB20Q9NX57 234 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 NCDNQ9UBB6 729 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 CLEC4EQ9ULY5 219 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 INVSQ9Y283 1065 aa8.27□□□□□ -1.09
PNKP-229ENST00000637897 NUP205Q92621 2012 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 PRRT4C9JH25 899 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 GFRA2O00451 464 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 AXIN1O15169 862 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 HOXC11O43248 304 aaPredicted RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 TULP3O75386 442 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 EPN2O95208 641 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 KAT7O95251 611 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 NFATC1O95644 943 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 FAM200BP0CF97 657 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 IRF1P10914 325 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 ADH5P11766 374 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 RARGP13631 454 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 CNR2P34972 360 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MXI1P50539 228 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MYL5Q02045 173 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MORC3Q14149 939 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 SF3A2Q15428 464 aaKnown RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 CRY1Q16526 586 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 FBXO43Q4G163 708 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms