RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TNFRSF4P43489 277 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 SLC6A11P48066 632 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 FMO5P49326 533 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 DGKEP52429 567 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 KDSRQ06136 332 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 GAB4Q2WGN9 574 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 FAM160A2Q8N612 972 aaPredicted RBP19.95■□□□□ 0.78
CLN6-221ENST00000637494 ANKRD52Q8NB46 1076 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 LOXL4Q96JB6 756 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 NT5C1BQ96P26 610 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 XPO6Q96QU8 1125 aaKnown RBP19.95■□□□□ 0.78
CLN6-221ENST00000637494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLN6-221ENST00000637494 CLIC5Q9NZA1 410 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 DEC1Q9P2X7 70 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 KIAA1257Q9ULG3 409 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 DMDP11532 3685 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 TBC1D3BA6NDS4 549 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 BIN1O00499 593 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 HOXC11O43248 304 aaPredicted RBP19.94■□□□□ 0.78
CLN6-221ENST00000637494 ALDH1A2O94788 518 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 FGFR1OPO95684 399 aaKnown RBP19.94■□□□□ 0.78
CLN6-221ENST00000637494 CD44P16070 742 aaKnown RBP19.94■□□□□ 0.78
CLN6-221ENST00000637494 BCAT1P54687 386 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 LRMPQ12912 555 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 RSPO4Q2I0M5 234 aaPredicted RBP19.94■□□□□ 0.78
CLN6-221ENST00000637494 FOXR2Q6PJQ5 311 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 DGLUCYQ7Z3D6 616 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 NMUR1Q9HB89 426 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 WDR35Q9P2L0 1181 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 EBF1Q9UH73 591 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 CDV3Q9UKY7 258 aaKnown RBP19.94■□□□□ 0.78
CLN6-221ENST00000637494 MMP17Q9ULZ9 603 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 CTNND2Q9UQB3 1225 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 ZNF510Q9Y2H8 683 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 USP3Q9Y6I4 520 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 CFAP54Q96N23 3096 aa19.94■□□□□ 0.78
CLN6-221ENST00000637494 P4HA2O15460 535 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 GADD45BO75293 160 aaPredicted RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 VDRP11473 427 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 PGFP49763 221 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 COG7P83436 770 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 PAK1Q13153 545 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 MORC3Q14149 939 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 ELF2Q15723 593 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 CSRP2Q16527 193 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 GOLGA7BQ2TAP0 167 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 USP39Q53GS9 565 aaKnown RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 EOGTQ5NDL2 527 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 RSRC2Q7L4I2 434 aaKnown RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 TRMT11Q7Z4G4 463 aaKnown RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 PIGZQ86VD9 579 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 C11orf74Q86VG3 221 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 C12orf40Q86WS4 652 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 ZNF276Q8N554 614 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 CCDC33Q8N5R6 958 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 NAT16Q8N8M0 369 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 LRRC4Q9HBW1 653 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 POLMQ9NP87 494 aaPredicted RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 SEMA4GQ9NTN9 838 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 POLR3BQ9NW08 1133 aaPredicted RBP19.93■□□□□ 0.78
CLN6-221ENST00000637494 OSER1Q9NX31 292 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 RASAL2Q9UJF2 1139 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 STRIP2Q9ULQ0 834 aa19.93■□□□□ 0.78
CLN6-221ENST00000637494 A0A0A0MRY4 1105 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 PPP1R3GB7ZBB8 358 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 PMM2O15305 246 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 RHOBTB1O94844 696 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 HOXC13P31276 330 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TIE1P35590 1138 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TKTL1P51854 596 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 BST2Q10589 180 aaKnown RBP19.92■□□□□ 0.78
CLN6-221ENST00000637494 TTI2Q6NXR4 508 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TTC30AQ86WT1 665 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TMEM25Q86YD3 366 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 MIB1Q86YT6 1006 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TRIML1Q8N9V2 468 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 IPO9Q96P70 1041 aaKnown RBP19.92■□□□□ 0.78
CLN6-221ENST00000637494 BBS2Q9BXC9 721 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 DCLK3Q9C098 648 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 NUDT5Q9UKK9 219 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 TSPAN16Q9UKR8 245 aa19.92■□□□□ 0.78
CLN6-221ENST00000637494 GVINP1Q7Z2Y8 2422 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 NEDD8-MDP1E9PL57 170 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 XPO1O14980 1071 aaKnown RBP19.91■□□□□ 0.78
CLN6-221ENST00000637494 MDM4O15151 490 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 TULP3O75386 442 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 KLF8O95600 359 aaPredicted RBP19.91■□□□□ 0.78
CLN6-221ENST00000637494 YWHAGP61981 247 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLN6-221ENST00000637494 UBE2HP62256 183 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 CRY1Q16526 586 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 GRAMD4Q6IC98 578 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 ANO7Q6IWH7 933 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 TPGS1Q6ZTW0 290 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 SCD5Q86SK9 330 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 KBTBD6Q86V97 674 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 PPM1KQ8N3J5 372 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 ALLCQ8N6M5 410 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 TXNDC5Q8NBS9 432 aaKnown RBP19.91■□□□□ 0.78
CLN6-221ENST00000637494 KCNV2Q8TDN2 545 aa19.91■□□□□ 0.78
CLN6-221ENST00000637494 WBP2Q969T9 261 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms