RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CRYMQ14894 314 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 TIGD7Q6NT04 549 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM20CQ8IXL6 584 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 TRAPPC12Q8WVT3 735 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SPATA31A3Q5VYP0 1347 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 RBMXL2O75526 392 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 WASP42768 502 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 TRIP10Q15642 601 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 TARSP26639 723 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 ARMC4Q5T2S8 1044 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 IL1R1P14778 569 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 SETMARQ53H47 684 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 MXRA8Q9BRK3 442 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 PLEKP08567 350 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 STX4Q12846 297 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM171BQ6P995 826 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 JAMLQ86YT9 394 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 SH3GL3Q99963 347 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 CDC42BPGQ6DT37 1551 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 ARSJQ5FYB0 599 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 ZNF618Q5T7W0 954 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 CYP4Z1Q86W10 505 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM228AQ86W67 206 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 ATG16L2Q8NAA4 619 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 SPPL2AQ8TCT8 520 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 STOML1Q9UBI4 398 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 PRR36Q9H6K5 1346 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 TCEA3O75764 348 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 IGKV5-2P06315 115 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 CNPP09543 421 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 CCDC130P13994 396 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 KLRK1P26718 216 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 OR1E1P30953 314 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 LGI2Q8N0V4 545 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 PIGKQ92643 395 aa18.36■□□□□ 0.53
CACNA1A-227ENST00000636549 A0A087WZ62 844 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 PEX5P50542 639 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 USP11P51784 963 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 PACS1Q6VY07 963 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 CASP10Q92851 521 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM111AQ96PZ2 611 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 FDXACB1Q9BRP7 624 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 ATP7BP35670 1465 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 AP3B1O00203 1094 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 KLRC1P26715 233 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 HNRNPH2P55795 449 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM83EQ2M2I3 478 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 CACTIN-AS1Q8N1I8 211 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 LRCH1Q9Y2L9 728 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 B2RBV5 119 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 CHUKO15111 745 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 BIKQ13323 160 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 GET4Q7L5D6 327 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 PSMC3IPQ9P2W1 217 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 RPS6KL1Q9Y6S9 549 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 PHF2O75151 1096 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 DHX34Q14147 1143 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 FRMD5Q7Z6J6 570 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 TRIT1Q9H3H1 467 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 LRRC8DQ7L1W4 858 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 TTC39CQ8N584 583 aa18.35■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC25A27O95847 323 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 DENND1BQ6P3S1 775 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 PARP8Q8N3A8 854 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 MRPS26Q9BYN8 205 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 NDRG2Q9UN36 371 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 IDH3BO43837 385 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 NBPF12Q5TAG4 269 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 ZNF57Q68EA5 555 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SLFN11Q7Z7L1 901 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 EMC1Q8N766 993 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 MDM1Q8TC05 714 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM172AQ8WUF8 416 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SKA1Q96BD8 255 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 NARS2Q96I59 477 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 ANGPT4Q9Y264 503 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 H3BN98 237 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM86B2P0C5J1 330 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 FMO4P31512 558 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 CES5AQ6NT32 575 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 PROSER1Q86XN7 944 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 ELMO1Q92556 727 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 PMEPA1Q969W9 287 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 CATSPER2Q96P56 530 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 VTA1Q9NP79 307 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 PDGFCQ9NRA1 345 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 KRT75O95678 551 aa18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 CCSAPQ6IQ19 270 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 IRX2Q9BZI1 471 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-227ENST00000636549 SNCAIPQ9Y6H5 919 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms