RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	KCNK13	Q9HB14	408 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	KIAA1586	Q9HCI6	787 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	GID8	Q9NWU2	228 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	DCTN4	Q9UJW0	460 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PCDHB2	Q9Y5E7	798 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CSAD	Q9Y600	493 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ASTN2	O75129	1339 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	WDR81	Q562E7	1941 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	OTOF	Q9HC10	1997 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	PTPRF	P10586	1907 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	KIAA1217	Q5T5P2	1943 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	SSC5D	A1L4H1	1573 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306		A0A0G2JND7	137 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	SFI1	A8K8P3	1242 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM114	B3SHH9	223 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	C8B	P07358	591 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ITGA8	P53708	1063 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ARL4C	P56559	192 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ENPEP	Q07075	957 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	DMP1	Q13316	513 aa	Predicted RBP	11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	TLR1	Q15399	786 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	SEPT7	Q16181	437 aa	Known RBP	11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	KCTD19	Q17RG1	926 aa	Predicted RBP	11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM132A	Q24JP5	1023 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	XKR9	Q5GH70	373 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	LPCAT4	Q643R3	524 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ELMSAN1	Q6PJG2	1045 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ANKS1B	Q7Z6G8	1248 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	CHSY1	Q86X52	802 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	DNER	Q8NFT8	737 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	NLRP4	Q96MN2	994 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	THTPA	Q9BU02	230 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	TSSK1B	Q9BXA7	367 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	VPS45	Q9NRW7	570 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	KCNK4	Q9NYG8	393 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	FETUB	Q9UGM5	382 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ASIC3	Q9UHC3	531 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ADAMTS6	Q9UKP5	1117 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF214	Q9UL59	606 aa	Predicted RBP	11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	CDH7	Q9ULB5	785 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	SORCS3	Q9UPU3	1222 aa		11.17	□□□□□ -0.62
CHD2-223	ENST00000636306	EXOC1L	A0A1B0GW35	172 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	MCF2L	O15068	1137 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DNAJA2	O60884	412 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DGKI	O75912	1065 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	MTA2	O94776	668 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	FUCA1	P04066	466 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PABPC1	P11940	636 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PRDX6	P30041	224 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CASP4	P49662	377 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	GTF2B	Q00403	316 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	NCOA4	Q13772	614 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	HIC1	Q14526	733 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CLEC16A	Q2KHT3	1053 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SPOPL	Q6IQ16	392 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DCLRE1A	Q6PJP8	1040 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	RFX8	Q6ZV50	586 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	C11orf74	Q86VG3	221 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DAW1	Q8N136	415 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CENPS	Q8N2Z9	138 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	TTC39C	Q8N584	583 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CCDC89	Q8N998	374 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	XXYLT1	Q8NBI6	393 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	OLIG1	Q8TAK6	271 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	TRPM4	Q8TD43	1214 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	NACC2	Q96BF6	587 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CTRC	Q99895	268 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SYT11	Q9BT88	431 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PLVAP	Q9BX97	442 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	JPH1	Q9HDC5	661 aa	Predicted RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	ADARB2	Q9NS39	739 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	B3GNT3	Q9Y2A9	372 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	MAD1L1	Q9Y6D9	718 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SBF1	O95248	1867 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306		H3BRJ5	948 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	TNFRSF10A	O00220	468 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	FSCN2	O14926	492 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DLD	P09622	509 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	HSPA8	P11142	646 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	ACTN1	P12814	892 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CHRNB2	P17787	502 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	KRT15	P19012	456 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC9A1	P19634	815 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PEX2	P28328	305 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	GCA	P28676	217 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SOX5	P35711	763 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PIK3CA	P42336	1068 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	MYBPC1	Q00872	1141 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SPCS2	Q15005	226 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	TRIP10	Q15642	601 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	PKN2	Q16513	984 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	LPCAT2	Q7L5N7	544 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	CYP2U1	Q7Z449	544 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	HAUS6	Q7Z4H7	955 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF276	Q8N554	614 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	DCPS	Q96C86	337 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	OTUD5	Q96G74	571 aa		11.16	□□□□□ -0.62

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