RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FAM171BQ6P995 826 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PGM2L1Q6PCE3 622 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 DCP1BQ8IZD4 617 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ATXN7L3BQ96GX2 97 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MCUBQ9NWR8 336 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 COMMD8Q9NX08 183 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NDOR1Q9UHB4 597 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NOVA2Q9UNW9 492 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ARHGAP31Q2M1Z3 1444 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 UHRF1BP1Q6BDS2 1440 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NESP48681 1621 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PCNAP12004 261 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CKBP12277 381 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PTSQ03393 145 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PIGHQ14442 188 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CRYMQ14894 314 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ERFEQ4G0M1 354 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 BEND5Q7L4P6 421 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TAS1R3Q7RTX0 852 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SETD9Q8NE22 299 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RMDN3Q96TC7 470 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SEPT5Q99719 369 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RNF26Q9BY78 433 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF341Q9BYN7 854 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 FEM1BQ9UK73 627 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CORO2BQ9UQ03 480 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PTGES3LE9PB15 166 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TSPAN19P0C672 248 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RPS2P15880 293 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CHRM3P20309 590 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MNDAP41218 407 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NUDT2P50583 147 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ARFIP1P53367 373 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 AP3S2P59780 193 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ACAP2Q15057 778 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TTC39BQ5VTQ0 682 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 FAAH2Q6GMR7 532 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CXXC5Q7LFL8 322 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GPALPP1Q8IXQ4 340 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CSGALNACT1Q8TDX6 532 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 QRFPRQ96P65 431 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ACOX2Q99424 681 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MTO1Q9Y2Z2 717 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 EMILIN1Q9Y6C2 1016 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TIAM1Q13009 1591 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GCC2Q8IWJ2 1684 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 URADA6NGE7 173 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CPT1AP50416 773 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SRSF11Q05519 484 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 STAT4Q14765 748 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PTPN21Q16825 1174 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KCNT1Q5JUK3 1230 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ATG16L2Q8NAA4 619 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ARHGEF26Q96DR7 871 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MYO5CQ9NQX4 1742 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PNMA6FA0A0J9YX94 578 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 FAM172BPA6NC97 362 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MAGEA13PA6NCF6 341 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC182A6NF36 153 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KCNA3P22001 575 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MAPK9P45984 424 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SULT1E1P49888 294 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SCNN1DP51172 638 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KDSRQ06136 332 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PDIA2Q13087 525 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PID1Q7Z2X4 250 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RNF180Q86T96 592 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NLRP10Q86W26 655 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GPIHBP1Q8IV16 184 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MYO1HQ8N1T3 1032 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KBTBD7Q8WVZ9 684 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TCEAL3Q969E4 200 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RERGQ96A58 199 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NACC2Q96BF6 587 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PAGE5Q96GU1 130 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 TIPINQ9BVW5 301 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 NCOA5Q9HCD5 579 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PIH1D3Q9NQM4 214 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 RCOR1Q9UKL0 485 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 IGSF9BQ9UPX0 1349 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PLAAQ9Y263 795 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 MAGED1Q9Y5V3 778 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF804BA4D1E1 1349 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 GMNCA6NCL1 334 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 SOWAHDA6NJG2 315 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 H3BN98 237 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 PFKFB1P16118 471 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 POLR2LP62875 67 aaKnown RBP6.18□□□□□ -1.42
SCN1A-212ENST00000636194 KYNUQ16719 465 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ATP6AP1LQ52LC2 224 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 FAM47AQ5JRC9 791 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 ARMCX6Q7L4S7 300 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
SCN1A-212ENST00000636194 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms