RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TMEM119Q4V9L6 283 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 DPH6Q7L8W6 267 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 ENGASEQ8NFI3 743 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 FBXO18Q8NFZ0 1043 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 CACTINQ8WUQ7 758 aaKnown RBP19.3■□□□□ 0.68
CLN6-212ENST00000636020 BAP1Q92560 729 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 PCED1BQ96HM7 432 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 FAM84AQ96KN4 292 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 MKRN2Q9H000 416 aaKnown RBP19.3■□□□□ 0.68
CLN6-212ENST00000636020 IKZF4Q9H2S9 585 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 SIX4Q9UIU6 781 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 ITGA11Q9UKX5 1188 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 SNX11Q9Y5W9 270 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 PCDHGA12O60330 932 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 OXTRP30559 389 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 TPMTP51580 245 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 RBP5P82980 135 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 KCNC4Q03721 635 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 RTP5Q14D33 572 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
CLN6-212ENST00000636020 GPBP1Q86WP2 473 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 MYCBPAPQ8TBZ2 947 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 POMGNT1Q8WZA1 660 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 DNMT3LQ9UJW3 386 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 AK5Q9Y6K8 562 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 SLCO1B1Q9Y6L6 691 aa19.29■□□□□ 0.68
CLN6-212ENST00000636020 ERVH48-1M5A8F1 160 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 IGLV3-19P01714 112 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 PDGFRBP09619 1106 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 TYRP14679 529 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 AFF3P51826 1226 aaKnown RBP19.28■□□□□ 0.68
CLN6-212ENST00000636020 CACNA2D1P54289 1103 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 CLDN6P56747 220 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 POSTNQ15063 836 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 BRSK2Q8IWQ3 736 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 XPO6Q96QU8 1125 aaKnown RBP19.28■□□□□ 0.68
CLN6-212ENST00000636020 NRSN2Q9GZP1 204 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 TMEM30AQ9NV96 361 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 ANKRD6Q9Y2G4 727 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 PCDHGA1Q9Y5H4 931 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 STON1Q9Y6Q2 735 aa19.28■□□□□ 0.68
CLN6-212ENST00000636020 TMEM131Q92545 1883 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 NEDD8-MDP1E9PL57 170 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 KCNK3O14649 394 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 KRT19P08727 400 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 CISD3P0C7P0 127 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 HNF1BP35680 557 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 TLE3Q04726 772 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 STARD3Q14849 445 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 TAF1BQ53T94 588 aaPredicted RBP19.27■□□□□ 0.68
CLN6-212ENST00000636020 HECTD3Q5T447 861 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 ZSWIM2Q8NEG5 633 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 PDZD8Q8NEN9 1154 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 OVCA2Q8WZ82 227 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 IGSF8Q969P0 613 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 WBP1Q96G27 269 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 FAM213AQ9BRX8 229 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 NUP58Q9BVL2 599 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 BBS2Q9BXC9 721 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 TRIM9Q9C026 710 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 ST6GALNAC4Q9H4F1 302 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.27■□□□□ 0.68
CLN6-212ENST00000636020 FTSJ1Q9UET6 329 aa19.27■□□□□ 0.68
CLN6-212ENST00000636020 PIEZO2Q9H5I5 2752 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 PYCARD-AS1I3L0S3 204 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
CLN6-212ENST00000636020 WARSP23381 471 aaKnown RBP19.26■□□□□ 0.67
CLN6-212ENST00000636020 YWHAQP27348 245 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 CCT8P50990 548 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 ANAPC15P60006 121 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 CXADRP78310 365 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 IFRD2Q12894 506 aaPredicted RBP19.26■□□□□ 0.67
CLN6-212ENST00000636020 TARDBPQ13148 414 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLN6-212ENST00000636020 DHX8Q14562 1220 aaKnown RBP19.26■□□□□ 0.67
CLN6-212ENST00000636020 MDH1BQ5I0G3 518 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 SNX30Q5VWJ9 437 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 FGF11Q92914 225 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 SIPA1Q96FS4 1042 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 PCED1AQ9H1Q7 454 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 CCSER2Q9H7U1 834 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 MARK1Q9P0L2 795 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 WDR35Q9P2L0 1181 aa19.26■□□□□ 0.67
CLN6-212ENST00000636020 CHORDC1Q9UHD1 332 aaPredicted RBP19.26■□□□□ 0.67
CLN6-212ENST00000636020 PTPN13Q12923 2485 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 H0Y8X5 98 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 PAPSS1O43252 624 aaPredicted RBP19.25■□□□□ 0.67
CLN6-212ENST00000636020 GREM1O60565 184 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 IRF1P10914 325 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 DGKGP49619 791 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 ZNF132P52740 706 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 HTR3DQ70Z44 454 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 TMPRSS6Q8IU80 811 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 NUP93Q8N1F7 819 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 FAM181AQ8N9Y4 354 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 FBXO32Q969P5 355 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 OSGEPQ9NPF4 335 aa19.25■□□□□ 0.67
CLN6-212ENST00000636020 NUMA1Q14980 2115 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 B8ZZF3 427 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms