RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 MTFR1Q15390 333 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.48
COL11A1-211ENST00000635193 URGCPQ8TCY9 931 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 TAS1R2Q8TE23 839 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 APOPT1Q96IL0 206 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 SMARCAD1Q9H4L7 1026 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 PCDHGC5Q9Y5F6 944 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 SLC30A1Q9Y6M5 507 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 DDX3XO00571 662 aaKnown RBP eCLIP12.02□□□□□ -0.48
COL11A1-211ENST00000635193 DDX5P17844 614 aaKnown RBP12.02□□□□□ -0.48
COL11A1-211ENST00000635193 ALOX12P18054 663 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 UNC45BQ8IWX7 931 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 RDM1Q8NG50 284 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 SH3KBP1Q96B97 665 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.48
COL11A1-211ENST00000635193 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.48
COL11A1-211ENST00000635193 SNPHO15079 494 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ADCY6O43306 1168 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ITGB3P05106 788 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 MYBL2P10244 700 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 RPL5P46777 297 aaKnown RBP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 RAD23AP54725 363 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CDK16Q00536 496 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 MREGQ8N565 214 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 LRRC40Q9H9A6 602 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 INTS13Q9NVM9 706 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CACNA2D2Q9NY47 1150 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ASB14A6NK59 587 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 KCNQ2O43526 872 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CYP2C8P10632 490 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 POU4F1Q01851 419 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 TRIM71Q2Q1W2 868 aaKnown RBP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ACCSLQ4AC99 568 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ARMC3Q5W041 872 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CWF19L1Q69YN2 538 aaKnown RBP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ACTL9Q8TC94 416 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 KLHL31Q9H511 634 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 PNMA8CA0A1B0GUJ8 204 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ABLIM1O14639 778 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ANXA9O76027 345 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CD4P01730 458 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 SREBF1P36956 1147 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 SLC1A6P48664 564 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.49
COL11A1-211ENST00000635193 IER5Q5VY09 327 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 SH3RF1Q7Z6J0 888 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 STRA8Q7Z7C7 330 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 HES6Q96HZ4 224 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 ARMCX1Q9P291 453 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 CTNNAL1Q9UBT7 734 aa12.02□□□□□ -0.49
COL11A1-211ENST00000635193 USP32Q8NFA0 1604 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SPDYE5A6NIY4 337 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SOAT2O75908 522 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 PGM3O95394 542 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CPB1P15086 417 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 TTKP33981 857 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SPDYE7PQ495Y7 208 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SEZ6Q53EL9 994 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ERMARDQ5T6L9 678 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 LRRC71Q8N4P6 559 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 IARS2Q9NSE4 1012 aaKnown RBP12.01□□□□□ -0.49
COL11A1-211ENST00000635193 PRMT7Q9NVM4 692 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-211ENST00000635193 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 KRT6BP04259 564 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 KRT6CP48668 564 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 MAPK10P53779 464 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 RAD51Q06609 339 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 NR1D2Q14995 579 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 SGO1Q5FBB7 561 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ISLR2Q6UXK2 745 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 MOSPD1Q9UJG1 213 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 GARTP22102 1010 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ELK3P41970 407 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CCNHP51946 323 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-211ENST00000635193 NME5P56597 212 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 IL5RAQ01344 420 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 PDK3Q15120 406 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CNGA2Q16280 664 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 TKFCQ3LXA3 575 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CKAP2Q8WWK9 683 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 CNPY3Q9BT09 278 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 TCF7L2Q9NQB0 619 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 GPATCH2LQ9NWQ4 482 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 ATXN2Q99700 1313 aaKnown RBP12.01□□□□□ -0.49
COL11A1-211ENST00000635193 LSM1O15116 133 aaKnown RBP12.01□□□□□ -0.49
COL11A1-211ENST00000635193 NPTX2P47972 431 aa12.01□□□□□ -0.49
COL11A1-211ENST00000635193 RGS4P49798 205 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms