RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 PLEKHA5Q9HAU0 1116 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 NPDC1Q9NQX5 325 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 HESX1Q9UBX0 185 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 STK38LQ9Y2H1 464 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TEX264Q9Y6I9 313 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ZNF236Q9UL36 1845 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TCRBV9S1A1TA0A576 114 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 BCLAF3A2AJT9 711 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 KBTBD13C9JR72 458 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TRDMT1O14717 391 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 HGSO14964 777 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 MDM4O15151 490 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 KCNN4O15554 427 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 LPXNO60711 386 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CSDE1O75534 798 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 TOMM70O94826 608 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 PFKMP08237 780 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ZFXP17010 805 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 RGS7P49802 495 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 NEK3P51956 506 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CCNA1P78396 465 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 SLC6A3Q01959 620 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 SLC18A2Q05940 514 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CDO1Q16878 200 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CCDC14Q49A88 953 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 SH3PXD2AQ5TCZ1 1133 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 SLC9A4Q6AI14 798 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TRNP1Q6NT89 227 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 MTHFD1LQ6UB35 978 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 OLFML1Q6UWY5 402 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 NLRP9Q7RTR0 991 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ZNF410Q86VK4 478 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 IGDCC3Q8IVU1 814 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 CDKL3Q8IVW4 592 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 MCUQ8NE86 351 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ADAMTS19Q8TE59 1207 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 AGAP11Q8TF27 550 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 STK32AQ8WU08 396 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 FAM172AQ8WUF8 416 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 LRRC39Q96DD0 335 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TBC1D31Q96DN5 1066 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 THOC1Q96FV9 657 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 CFAP36Q96G28 342 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 PPP1R16BQ96T49 567 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ZNF670Q9BS34 389 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TUBB6Q9BUF5 446 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 DNAI2Q9GZS0 605 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 MANSC1Q9H8J5 431 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 EBF2Q9HAK2 575 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 USP29Q9HBJ7 922 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 NGRNQ9NPE2 291 aaKnown RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 RAB6BQ9NRW1 208 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 ZFP69BQ9UJL9 534 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
GPC3-204ENST00000631057 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.39□□□□□ -1.07
GPC3-204ENST00000631057 TRIP12Q14669 1992 aaPredicted RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 C2orf72A6NCS6 295 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 TMEM88BA6NKF7 163 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 GRAP2O75791 330 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 FAM155BO75949 473 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 KRT37O76014 449 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 DDNO94850 711 aaPredicted RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 IL1BP01584 269 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 DHRS4L1P0CG22 281 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 SCNN1AP37088 669 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 PTPN9P43378 593 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 YWHAZP63104 245 aaKnown RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 PKDCCQ504Y2 493 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 LGSNQ5TDP6 509 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 TAPT1Q6NXT6 567 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 SCYL2Q6P3W7 929 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 TMEM110Q86TL2 294 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 SLC26A11Q86WA9 606 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 UNC93AQ86WB7 457 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 PQLC3Q8N755 202 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 LRRC52Q8N7C0 313 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 PIWIL1Q96J94 861 aaKnown RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 MYCBPQ99417 103 aaPredicted RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 SNRNP25Q9BV90 132 aaKnown RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 TSSK1BQ9BXA7 367 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
GPC3-204ENST00000631057 IQCGQ9H095 443 aaKnown RBP8.38□□□□□ -1.07
GPC3-204ENST00000631057 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms