RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ZCWPW1Q9H0M4 648 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 LRRC19Q9H756 370 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 CSNK1G1Q9HCP0 422 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 NGRNQ9NPE2 291 aaKnown RBP10.8□□□□□ -0.68
ATRX-216ENST00000624403 CHST7Q9NS84 486 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.8□□□□□ -0.68
ATRX-216ENST00000624403 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 ADAM28Q9UKQ2 775 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 USP18Q9UMW8 372 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
ATRX-216ENST00000624403 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 SYN3O14994 580 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 PRPSAP2O60256 369 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 UPP2O95045 317 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 GALTP07902 379 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 OR4Q2P0C623 313 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 HSPA1AP0DMV8 641 aaKnown RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 HSPA1BP0DMV9 641 aaKnown RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 DESP17661 470 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 KDELR1P24390 212 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 KCNJ1P48048 391 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 HDAC4P56524 1084 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 ADCY2Q08462 1091 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 SNX1Q13596 522 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 SLC39A12Q504Y0 691 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 FAM171A1Q5VUB5 890 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 KAZNQ674X7 775 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 SCYL2Q6P3W7 929 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 JAMLQ86YT9 394 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 DEFB106AQ8N104 65 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 CMASQ8NFW8 434 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 BCL7CQ8WUZ0 217 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 CENPIQ92674 756 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 SLC2A13Q96QE2 648 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 NCAPGQ9BPX3 1015 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 GPR62Q9BZJ7 368 aa10.79□□□□□ -0.68
ATRX-216ENST00000624403 DMAP1Q9NPF5 467 aaPredicted RBP10.79□□□□□ -0.68
ATRX-216ENST00000624403 TNFRSF10AO00220 468 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TRIM66O15016 1216 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 DAPK3O43293 454 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 SASH3O75995 380 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TJP3O95049 919 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TIMP1P01033 207 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 CD48P09326 243 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 USP17L7P0C7H9 530 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 FGFR3P22607 806 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 ITGB8P26012 769 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 PBX3P40426 434 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 MATKP42679 507 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TNNT3P45378 269 aaPredicted RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 SULT1E1P49888 294 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 ARSEP51690 589 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 DAOAP59103 153 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 YWHAZP63104 245 aaKnown RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 MRPL58Q14197 206 aaKnown RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 CCNG2Q16589 344 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 CTXN3Q4LDR2 81 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TFDP3Q5H9I0 405 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 OTUD1Q5VV17 481 aaPredicted RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 FUT10Q6P4F1 479 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 HFE2Q6ZVN8 426 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 NECAB2Q7Z6G3 386 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 DDX42Q86XP3 938 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATRX-216ENST00000624403 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 CCDC105Q8IYK2 499 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 DCP1BQ8IZD4 617 aaKnown RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 KCTD6Q8NC69 237 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TEKT4Q8WW24 435 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 SEC14L1Q92503 715 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 FAM149B1Q96BN6 582 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 B3GALT6Q96L58 329 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TBCBQ99426 244 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 FAM118BQ9BPY3 351 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 FUT8Q9BYC5 575 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 RAB17Q9H0T7 212 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 DPH5Q9H2P9 285 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 CNGB3Q9NQW8 809 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 PRDM5Q9NQX1 630 aaPredicted RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 HOMER3Q9NSC5 361 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATRX-216ENST00000624403 GPATCH2LQ9NWQ4 482 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 RASAL2Q9UJF2 1139 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 NFU1Q9UMS0 254 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 EFR3BQ9Y2G0 817 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 UTP11Q9Y3A2 253 aaKnown RBP10.78□□□□□ -0.68
ATRX-216ENST00000624403 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATRX-216ENST00000624403 TET1Q8NFU7 2136 aa10.78□□□□□ -0.68
ATRX-216ENST00000624403 TTC3P53804 2025 aa10.77□□□□□ -0.68
ATRX-216ENST00000624403 ABHD14A-ACY1A0A1B0GW23 586 aa10.77□□□□□ -0.69
ATRX-216ENST00000624403 OR6C75A6NL08 312 aa10.77□□□□□ -0.69
ATRX-216ENST00000624403 YJEFN3A6XGL0 299 aa10.77□□□□□ -0.69
ATRX-216ENST00000624403 NT5C1B-RDH14C9J2C7 533 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms