RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SGCDQ92629 289 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 LXNQ9BS40 222 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ABHD16BQ9H3Z7 469 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ALPPP05187 535 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ACAT1P24752 427 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 INPP5BP32019 993 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF445P59923 1031 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 C11orf74Q86VG3 221 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 PSMB7Q99436 277 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 DNAJC28Q9NX36 388 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 UBP1Q9NZI7 540 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ALBP02768 609 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ANXA6P08133 673 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ACTR3P61158 418 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 PURAQ00577 322 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FPGSQ05932 587 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 USP31Q70CQ4 1352 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ANKRD23Q86SG2 305 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SUCLG2Q96I99 432 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FAIM2Q9BWQ8 316 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 WWP1Q9H0M0 922 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 HHATLQ9HCP6 504 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SUSD2Q9UGT4 822 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CRB1P82279 1406 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 F5H6K3 240 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SLC26A4O43511 780 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 RHOBTB1O94844 696 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 GSTM1P09488 218 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 PEX19P40855 299 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KLRC3Q07444 240 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 C17orf80Q9BSJ5 609 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KCTD5Q9NXV2 234 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CHORDC1Q9UHD1 332 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 AAR2Q9Y312 384 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 MAST1Q9Y2H9 1570 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 MSH4O15457 936 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF208O43345 1280 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 MMEP08473 750 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SLC26A3P40879 764 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SNTA1Q13424 505 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CUL3Q13618 768 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KBTBD12Q3ZCT8 623 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 AMIGO1Q86WK6 493 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 MCM8Q9UJA3 840 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 H0Y3Z8 333 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FOXP2O15409 715 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ARRB1P49407 418 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FAM171A1Q5VUB5 890 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZSCAN4Q8NAM6 433 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CATSPER1Q8NEC5 780 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZDHHC15Q96MV8 337 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ANKRD6Q9Y2G4 727 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KLHL20Q9Y2M5 609 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CREB1P16220 341 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ATP5F1P24539 256 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CSTF2P33240 577 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 RPS6KA3P51812 740 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CACNB3P54284 484 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 RAB2AP61019 212 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SNRPFP62306 86 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FANCCQ00597 558 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CEP78Q5JTW2 689 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 E2F7Q96AV8 911 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 UROC1Q96N76 676 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SLC29A3Q9BZD2 475 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 KLHL4Q9C0H6 718 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 HAUS4Q9H6D7 363 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 OPA3Q9H6K4 179 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ELL3Q9HB65 397 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 PADI2Q9Y2J8 665 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 GFPT2O94808 682 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PAICSP22234 425 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 GEMP55040 296 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MTTPP55157 894 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SNRPD1P62314 119 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 CERCAMQ5T4B2 595 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 GFM2Q969S9 779 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 VPS35Q96QK1 796 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 RNF121Q9H920 327 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TMPRSS11EQ9UL52 423 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TMEM265A0A087WTH1 108 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TMCC2O75069 709 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SERPINA4P29622 427 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PCSK7Q16549 785 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 RASGRP3Q8IV61 690 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 FAM20CQ8IXL6 584 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 CKAP2Q8WWK9 683 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 TINF2Q9BSI4 451 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ERVW-1Q9UQF0 538 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 E9PBE3 544 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 SRP72O76094 671 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 EXOC3L1Q86VI1 746 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MED8Q96G25 268 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 PDCD10Q9BUL8 212 aa6.48□□□□□ -1.37
CDKL5-205ENST00000623535 MRM3Q9HC36 420 aaKnown RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF70Q9UC06 446 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-205ENST00000623535 DTNBO60941 627 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms