RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 ARHGEF3Q9NR81 526 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 TRIM10Q9UDY6 481 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 CFL2Q9Y281 166 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 SNX9Q9Y5X1 595 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 LDOC1O95751 146 aaPredicted RBP6.6□□□□□ -1.35
ERCC6-209ENST00000623073 RBP3P10745 1247 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 GNA15P30679 374 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 GNL1P36915 607 aaPredicted RBP6.6□□□□□ -1.35
ERCC6-209ENST00000623073 ITGADQ13349 1161 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 LARGE2Q8N3Y3 721 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 CENPIQ92674 756 aaPredicted RBP6.6□□□□□ -1.35
ERCC6-209ENST00000623073 MED15Q96RN5 788 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 FAM118BQ9BPY3 351 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 RTKNQ9BST9 563 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 IRX2Q9BZI1 471 aaPredicted RBP6.6□□□□□ -1.35
ERCC6-209ENST00000623073 MTMR12Q9C0I1 747 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 LRRC40Q9H9A6 602 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 NCK2O43639 380 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 NMT2O60551 498 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 TCF4P15884 667 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 CCNG1P51959 295 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 RPS8P62241 208 aaKnown RBP6.6□□□□□ -1.35
ERCC6-209ENST00000623073 ATP13A5Q4VNC0 1218 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 C4orf33Q8N1A6 199 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 RAB42Q8N4Z0 105 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 GOLM1Q8NBJ4 401 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 DNAJB8Q8NHS0 232 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 ZBTB9Q96C00 473 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 C12orf66Q96MD2 445 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 TCEAL7Q9BRU2 100 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 ZNF577Q9BSK1 485 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 TMEM216Q9P0N5 145 aa6.6□□□□□ -1.35
ERCC6-209ENST00000623073 FAM172BPA6NC97 362 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 PRMT3O60678 531 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 EPHB2P29323 1055 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CDH4P55283 916 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 PLS1Q14651 629 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CCDC28AQ8IWP9 274 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 WNK4Q96J92 1243 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ZNF560Q96MR9 790 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RPS6KA6Q9UK32 745 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 UNC13BO14795 1591 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ITGA2P17301 1181 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CHRNDQ07001 517 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 HECTD3Q5T447 861 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 DENND1BQ6P3S1 775 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 HEATR4Q86WZ0 1026 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TTC29Q8NA56 475 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ZNF333Q96JL9 665 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 HOPXQ9BPY8 73 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 DDX18Q9NVP1 670 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 PTTG3PQ9NZH4 202 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RPL3P39023 403 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 PRELPP51888 382 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CSE1LP55060 971 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 FAM69CQ0P6D2 419 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 SF3A3Q12874 501 aaKnown RBP eCLIP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 MOGQ16653 247 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TMEM44Q2T9K0 475 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TBCELQ5QJ74 424 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 SLFN13Q68D06 897 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 FOXP4Q8IVH2 680 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 GJD3Q8N144 294 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 FBXO40Q9UH90 709 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CDC42BPAQ5VT25 1732 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TRIM38O00635 465 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 PEX14O75381 377 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CFBP00751 764 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CYP1A1P04798 512 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 GPIP06744 558 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RRP1BQ14684 758 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ENDOVQ8N8Q3 282 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 SGF29Q96ES7 293 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RNFT2Q96EX2 444 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 C9orf72Q96LT7 481 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 GPATCH1Q9BRR8 931 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 GRIP2Q9C0E4 1043 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RACGAP1Q9H0H5 632 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 LRRC19Q9H756 370 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 DDX43Q9NXZ2 648 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ZSWIM5Q9P217 1185 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ANAPC2Q9UJX6 822 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ARHGEF33A8MVX0 844 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ORC5O43913 435 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 EDF1O60869 148 aaKnown RBP6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CCNKO75909 580 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TGM2P21980 687 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 CASP4P49662 377 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 RAB27AP51159 221 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 EFR3AQ14156 821 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TTC23LQ6PF05 361 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 ANKS3Q6ZW76 656 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 METTL23Q86XA0 190 aa6.59□□□□□ -1.35
ERCC6-209ENST00000623073 TBC1D16Q8TBP0 767 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms