RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MFSD5Q6N075 450 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 CENPUQ71F23 418 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 PPIL6Q8IXY8 311 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 ARL8AQ96BM9 186 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 FAM149B1Q96BN6 582 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 PGAP3Q96FM1 320 aaPredicted RBP17.04■□□□□ 0.32
LDB3-208ENST00000623007 PCED1BQ96HM7 432 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 PIWIL1Q96J94 861 aaKnown RBP17.04■□□□□ 0.32
LDB3-208ENST00000623007 SERPINB12Q96P63 405 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 CAPS2Q9BXY5 557 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 CRTAC1Q9NQ79 661 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
LDB3-208ENST00000623007 PIK3R2O00459 728 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 GABBR2O75899 941 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 POMCP01189 267 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 TKTL1P51854 596 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 CAP1Q01518 475 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 STAT4Q14765 748 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 OVOS1Q6IE37 1185 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 PAQR9Q6ZVX9 377 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 LRRC8DQ7L1W4 858 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 TAOK1Q7L7X3 1001 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 CCDC25Q86WR0 208 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 CDKL3Q8IVW4 592 aaPredicted RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 RIBC1Q8N443 379 aaPredicted RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 NPY6RQ99463 290 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.03■□□□□ 0.32
LDB3-208ENST00000623007 CDC42EP4Q9H3Q1 356 aaKnown RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 SEMA4AQ9H3S1 761 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 DMAP1Q9NPF5 467 aaPredicted RBP17.03■□□□□ 0.32
LDB3-208ENST00000623007 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 PAK5Q9P286 719 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 AP4E1Q9UPM8 1137 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 RAD54BQ9Y620 910 aa17.03■□□□□ 0.32
LDB3-208ENST00000623007 BCLAF3A2AJT9 711 aaKnown RBP17.02■□□□□ 0.32
LDB3-208ENST00000623007 CAPN9O14815 690 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 RASGRF2O14827 1237 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 TP73O15350 636 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
LDB3-208ENST00000623007 SULT1E1P49888 294 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 DYNLT1P63172 113 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 ADCY1Q08828 1119 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 CBLBQ13191 982 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 TRIP13Q15645 432 aaPredicted RBP17.02■□□□□ 0.32
LDB3-208ENST00000623007 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 PDZD4Q76G19 769 aaPredicted RBP17.02■□□□□ 0.32
LDB3-208ENST00000623007 BNIPLQ7Z465 357 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 NTAN1Q96AB6 310 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 ACSF2Q96CM8 615 aaPredicted RBP17.02■□□□□ 0.32
LDB3-208ENST00000623007 RTP4Q96DX8 246 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 TMEM121Q9BTD3 319 aa17.02■□□□□ 0.32
LDB3-208ENST00000623007 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 H3BRJ5 948 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 SYN3O14994 580 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 RGS16O15492 202 aaPredicted RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 ATP2C2O75185 946 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 IFNB1P01574 187 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 CDK7P50613 346 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 MAP3K7CLP57077 242 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 DAOAP59103 153 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 DSC1Q08554 894 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 TAF5Q15542 800 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 DCAF6Q58WW2 860 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 RNASEH2BQ5TBB1 312 aaKnown RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 DARS2Q6PI48 645 aaKnown RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 TRAF7Q6Q0C0 670 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 DEFB106AQ8N104 65 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 RBM15Q96T37 977 aaKnown RBP eCLIP17.01■□□□□ 0.31
LDB3-208ENST00000623007 EPB41L4BQ9H329 900 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 CENPHQ9H3R5 247 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 HCRTO43612 131 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 ZBED1O96006 694 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 CD48P09326 243 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 L1CAMP32004 1257 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 VPS41P49754 854 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 VEGFBP49765 207 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 ARL4CP56559 192 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 YWHAHQ04917 246 aaPredicted RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 NR1H3Q13133 447 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 EFHC2Q5JST6 749 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 SH3PXD2AQ5TCZ1 1133 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 PLD5Q8N7P1 536 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 ZNF296Q8WUU4 475 aaPredicted RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 SEPT8Q92599 483 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 TRPV6Q9H1D0 765 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 ADAM7Q9H2U9 754 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
LDB3-208ENST00000623007 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
LDB3-208ENST00000623007 A0A087WUV0 522 aaPredicted RBP17■□□□□ 0.31
LDB3-208ENST00000623007 MYBPHLA2RUH7 354 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms