RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SLC4A11Q8NBS3 891 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
ATRX-208ENST00000622960 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
ATRX-208ENST00000622960 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 FBRSL1Q9HCM7 1045 aaKnown RBP13.75□□□□□ -0.21
ATRX-208ENST00000622960 CLIC5Q9NZA1 410 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 DEC1Q9P2X7 70 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 RASAL2Q9UJF2 1139 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 CDV3Q9UKY7 258 aaKnown RBP13.75□□□□□ -0.21
ATRX-208ENST00000622960 KIAA1257Q9ULG3 409 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 ZNF510Q9Y2H8 683 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 FAM186AA6NE01 2351 aa13.75□□□□□ -0.21
ATRX-208ENST00000622960 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 TBC1D3BA6NDS4 549 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 HHLA1C9JL84 531 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 ZBTB24O43167 697 aaPredicted RBP13.74□□□□□ -0.21
ATRX-208ENST00000622960 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
ATRX-208ENST00000622960 SETSIPP0DME0 302 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 VDRP11473 427 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 PXNP49023 591 aaPredicted RBP13.74□□□□□ -0.21
ATRX-208ENST00000622960 DGKEP52429 567 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 COG7P83436 770 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 MORC3Q14149 939 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATRX-208ENST00000622960 STILQ15468 1287 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 EOGTQ5NDL2 527 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 RHBDF2Q6PJF5 856 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 ERMP1Q7Z2K6 904 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 TTC30AQ86WT1 665 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 MIB1Q86YT6 1006 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 TATDN2Q93075 761 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 POLMQ9NP87 494 aaPredicted RBP13.74□□□□□ -0.21
ATRX-208ENST00000622960 OLA1Q9NTK5 396 aaKnown RBP13.74□□□□□ -0.21
ATRX-208ENST00000622960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATRX-208ENST00000622960 WDR35Q9P2L0 1181 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 TSPAN16Q9UKR8 245 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 MMP17Q9ULZ9 603 aa13.74□□□□□ -0.21
ATRX-208ENST00000622960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATRX-208ENST00000622960 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 PMM2O15305 246 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 HRO43593 1189 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 PAEPP09466 180 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 TNFRSF4P43489 277 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 TKTL1P51854 596 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 SRSF5Q13243 272 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 TPD52L1Q16890 204 aaPredicted RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 USP39Q53GS9 565 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 GRAMD4Q6IC98 578 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 TTI2Q6NXR4 508 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 TMEM270Q6UE05 265 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 HTR3DQ70Z44 454 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 PIGZQ86VD9 579 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 C12orf50Q8NA57 414 aaPredicted RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 RNF139Q8WU17 664 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 DNAJC17Q9NVM6 304 aaKnown RBP13.73□□□□□ -0.21
ATRX-208ENST00000622960 C2orf42Q9NWW7 574 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATRX-208ENST00000622960 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
ATRX-208ENST00000622960 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 PTPRZ1P23471 2315 aaPredicted RBP13.72□□□□□ -0.21
ATRX-208ENST00000622960 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
ATRX-208ENST00000622960 TBX18O95935 607 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 ZBED1O96006 694 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 CYBBP04839 570 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 GBP1P32455 592 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 TIE1P35590 1138 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 CHKAP35790 457 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 STX17P56962 302 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
ATRX-208ENST00000622960 EFEMP1Q12805 493 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 E2F5Q15329 346 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 SDE2Q6IQ49 451 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 TPGS1Q6ZTW0 290 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 DGLUCYQ7Z3D6 616 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
ATRX-208ENST00000622960 NAT16Q8N8M0 369 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 EBF1Q9UH73 591 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
ATRX-208ENST00000622960 RIF1Q5UIP0 2472 aaKnown RBP13.72□□□□□ -0.21
ATRX-208ENST00000622960 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
ATRX-208ENST00000622960 K7EQS6 105 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms