RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	NPTXR	O95502	500 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	IFNB1	P01574	187 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	MCF2	P10911	925 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	CD19	P15391	556 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SKIV2L2	P42285	1042 aa	Known RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	RAP1GAP	P47736	663 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	GDF10	P55107	478 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	PSMC1	P62191	440 aa	Known RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SPARCL1	Q14515	664 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	GPNMB	Q14956	572 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SMTNL2	Q2TAL5	461 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	ZNF667	Q5HYK9	610 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	DBF4B	Q8NFT6	615 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	APBB2	Q92870	758 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SMC6	Q96SB8	1091 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	CPXM1	Q96SM3	734 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	FTHL17	Q9BXU8	183 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	PITPNM3	Q9BZ71	974 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SDCBP2	Q9H190	292 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	YY1AP1	Q9H869	796 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	ZWILCH	Q9H900	591 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	NOD2	Q9HC29	1040 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	NXF1	Q9UBU9	619 aa	Known RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	CXCL10	P02778	98 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	GABRB2	P47870	512 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	PDK4	Q16654	411 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	ASRGL1	Q7L266	308 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	ECHDC2	Q86YB7	292 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	DHRS4	Q9BTZ2	278 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	KIF9	Q9HAQ2	790 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SAE1	Q9UBE0	346 aa	Predicted RBP	18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	RABGEF1	Q9UJ41	708 aa		18.19	■□□□□ 0.5
FAM3A-222	ENST00000621967	SMAP	O00193	183 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ERBB2	P04626	1255 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	CXCL8	P10145	99 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ALAD	P13716	330 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	CCNB1	P14635	433 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	CSF2RA	P15509	400 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	KRT15	P19012	456 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	KCNJ2	P63252	427 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ACAP1	Q15027	740 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ANKRD22	Q5VYY1	191 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	C1orf127	Q8N9H9	656 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	SLC4A11	Q8NBS3	891 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	CMAS	Q8NFW8	434 aa	Predicted RBP	18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	CXorf38	Q8TB03	319 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	MCRS1	Q96EZ8	462 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ADAM2	Q99965	735 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	EIF2A	Q9BY44	585 aa	Known RBP	18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	RPF1	Q9H9Y2	349 aa	Known RBP	18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	ARHGEF3	Q9NR81	526 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	METTL5	Q9NRN9	209 aa	Known RBP	18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	GRID1	Q9ULK0	1009 aa		18.18	■□□□□ 0.5
FAM3A-222	ENST00000621967	RPL22	P35268	128 aa	Known RBP	18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	ARL4C	P56559	192 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	GEMIN4	P57678	1058 aa	Known RBP	18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	OSTN	P61366	133 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	DYNLT1	P63172	113 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	GAD2	Q05329	585 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	MYO1E	Q12965	1108 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	KCNT1	Q5JUK3	1230 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	TMEM192	Q8IY95	271 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	ATP11C	Q8NB49	1132 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	WDR83	Q9BRX9	315 aa	Known RBP	18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	TACO1	Q9BSH4	297 aa	Known RBP	18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	VRTN	Q9H8Y1	702 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	RALGAPA2	Q2PPJ7	1873 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	APOC4-APOC2	K7ER74	178 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	MGEA5	O60502	916 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	CILP	O75339	1184 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	BANF1	O75531	89 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	APOC2	P02655	101 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	CD48	P09326	243 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	SYN1	P17600	705 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	PHB	P35232	272 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	RPA3	P35244	121 aa	Predicted RBP	18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	MSS51	Q4VC12	460 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	FNBP1L	Q5T0N5	605 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	CAPN12	Q6ZSI9	719 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	FAM47E	Q6ZV65	393 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	ANKMY2	Q8IV38	441 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	C4orf33	Q8N1A6	199 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	EMC1	Q8N766	993 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	TWNK	Q96RR1	684 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	FAM105A	Q9NUU6	356 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	PHTF1	Q9UMS5	762 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	TET1	Q8NFU7	2136 aa		18.17	■□□□□ 0.5
FAM3A-222	ENST00000621967	EDF1	O60869	148 aa	Known RBP	18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	NFIC	P08651	508 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	KRT19	P08727	400 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	TSHR	P16473	764 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	IBSP	P21815	317 aa	Predicted RBP	18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	RAB27A	P51159	221 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	CDH8	P55286	799 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	PDE4C	Q08493	712 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	DSC3	Q14574	896 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	SLC1A5	Q15758	541 aa		18.16	■□□□□ 0.5
FAM3A-222	ENST00000621967	KYAT1	Q16773	422 aa		18.16	■□□□□ 0.5

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