RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 TSPAN16Q9UKR8 245 aa18.9■□□□□ 0.62
SCAMP4-213ENST00000621748 DCHS1Q96JQ0 3298 aa18.9■□□□□ 0.62
SCAMP4-213ENST00000621748 P4HA2O15460 535 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 GNA14O95837 355 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 ADH1CP00326 375 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 CD19P15391 556 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 MARSP56192 900 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 YWHAEP62258 255 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 PDE4CQ08493 712 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 GOLGA7BQ2TAP0 167 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 KLHDC10Q6PID8 442 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 HTR3DQ70Z44 454 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 TMEM25Q86YD3 366 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 SFTPA1Q8IWL2 248 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 KIAA2013Q8IYS2 634 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 NT5C1BQ96P26 610 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 MED15Q96RN5 788 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 NCDNQ9UBB6 729 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 SLC8A2Q9UPR5 921 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 EML5Q05BV3 1969 aa18.89■□□□□ 0.61
SCAMP4-213ENST00000621748 RNF225M0QZC1 329 aaPredicted RBP18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 VDRP11473 427 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 PSEN1P49768 467 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 SEC13P55735 322 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 C10orf120Q5SQS8 335 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 TMEM270Q6UE05 265 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 SYT13Q7L8C5 426 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 WDR5BQ86VZ2 330 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 ARHGEF19Q8IW93 802 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 PPM1KQ8N3J5 372 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 EHBP1Q8NDI1 1231 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 UBA3Q8TBC4 463 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 TFAP2BQ92481 460 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 PNKPQ96T60 521 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 DNMT3LQ9UJW3 386 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 SPAG17Q6Q759 2223 aa18.88■□□□□ 0.61
SCAMP4-213ENST00000621748 O00370 1275 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 CNR2P34972 360 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 EIF2DP41214 584 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 TKTL1P51854 596 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 GAD2Q05329 585 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 CETN1Q12798 172 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 SIM2Q14190 667 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 DMC1Q14565 340 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 C2orf27AQ580R0 203 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 PRR23BQ6ZRT6 265 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 ETFBKMTQ8IXQ9 262 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 PHTF2Q8N3S3 785 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 NAT16Q8N8M0 369 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 USP33Q8TEY7 942 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 NDRG1Q92597 394 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 ZSWIM1Q9BR11 485 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 CEP250Q9BV73 2442 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 SPHK2Q9NRA0 654 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 RWDD2AQ9UIY3 292 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 KIAA1257Q9ULG3 409 aa18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCAMP4-213ENST00000621748 A0A0A0MRY4 1105 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 CCDC163A0A0D9SF12 145 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 HOXC11O43248 304 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 KAT7O95251 611 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 CALCAP01258 141 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 AFPP02771 609 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 RALAP11233 206 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 BCAT1P54687 386 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 SLC8A3P57103 927 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 BST2Q10589 180 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 ANO4Q32M45 955 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 PKDCCQ504Y2 493 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 PM20D1Q6GTS8 502 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 BHLHA9Q7RTU4 235 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 MIB1Q86YT6 1006 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 CAMKK1Q8N5S9 505 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 ULBP1Q9BZM6 244 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 NAT10Q9H0A0 1025 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 ARHGEF4Q9NR80 690 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 HESX1Q9UBX0 185 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 RAB23Q9ULC3 237 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 RALGAPA1Q6GYQ0 2036 aa18.86■□□□□ 0.61
SCAMP4-213ENST00000621748 TULP3O75386 442 aa18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 STC2O76061 302 aa18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 FGFR1OPO95684 399 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 ZBED1O96006 694 aa18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 APODP05090 189 aa18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 PAEPP09466 180 aa18.85■□□□□ 0.61
SCAMP4-213ENST00000621748 CCDC192P0DO97 292 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms