RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 TEX28O15482 410 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 TRUB2O95900 331 aaKnown RBP16.62■□□□□ 0.25
CBWD3-216ENST00000621396 DNAJB1P25685 340 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 GTF2F1P35269 517 aaKnown RBP eCLIP16.62■□□□□ 0.25
CBWD3-216ENST00000621396 ERVFC1P60507 584 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 MMRN1Q13201 1228 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 FAM182AQ5T1J6 154 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 VSTM1Q6UX27 236 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 TMC7Q7Z402 723 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 NUP93Q8N1F7 819 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 CCDC185Q8N715 623 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 HAUS1Q96CS2 278 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 SLC9A7Q96T83 725 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 C11orf84Q9BUA3 381 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-216ENST00000621396 CYP4F11Q9HBI6 524 aa16.62■□□□□ 0.25
CBWD3-216ENST00000621396 SAE1Q9UBE0 346 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-216ENST00000621396 PRPSAP2O60256 369 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 CA3P07451 260 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 DYNLT1P63172 113 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 ODF2Q5BJF6 829 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 PM20D1Q6GTS8 502 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 KATNAL2Q8IYT4 538 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
CBWD3-216ENST00000621396 PIGVQ9NUD9 493 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 PDE4DIPQ5VU43 2346 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 A0A1W2PQH9 124 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 LINC01553A4QN01 128 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 CES2O00748 559 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 FBXO21O94952 628 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 PBX2P40425 430 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SLC25A52Q3SY17 297 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 DENND5BQ6ZUT9 1274 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SCD5Q86SK9 330 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SLC13A5Q86YT5 568 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-216ENST00000621396 PYROXD2Q8N2H3 581 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 ZNF461Q8TAF7 563 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SPPL2BQ8TCT7 592 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 CALN1Q9BXU9 219 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 ANLNQ9NQW6 1124 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 AAASQ9NRG9 546 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 SFMBT1Q9UHJ3 866 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 KIAA1671Q9BY89 1806 aa16.61■□□□□ 0.25
CBWD3-216ENST00000621396 HIDE1A8MVS5 230 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 DAB1O75553 588 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 TBX18O95935 607 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 CNPP09543 421 aaKnown RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 HAPLN1P10915 354 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 NOS2P35228 1153 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 PPP6R3Q5H9R7 873 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 KCTD6Q8NC69 237 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 TCF25Q9BQ70 676 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 GMIPQ9P107 970 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 BACE2Q9Y5Z0 518 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 ZSCAN5CA6NGD5 496 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 DPYSL4O14531 572 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 TRIM66O15016 1216 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 MSI1O43347 362 aaKnown RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 PPM1AP35813 382 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 GGCXP38435 758 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 SNX1Q13596 522 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 EXD1Q8NHP7 514 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 C8orf48Q96LL4 319 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 NPY6RQ99463 290 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 SNRNP25Q9BV90 132 aaKnown RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 HERC2P3Q9BVR0 1158 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 OSBPL8Q9BZF1 889 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 PNPLA8Q9NP80 782 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 DDIT4Q9NX09 232 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 RNF14Q9UBS8 474 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 AMACRQ9UHK6 382 aa16.6■□□□□ 0.25
CBWD3-216ENST00000621396 R3HDM2Q9Y2K5 976 aaKnown RBP16.6■□□□□ 0.25
CBWD3-216ENST00000621396 C3orf70A6NLC5 250 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-216ENST00000621396 I6L893 689 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-216ENST00000621396 ATF2P15336 505 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PCK1P35558 622 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 BMPR1AP36894 532 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PTPN9P43378 593 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 KCNJ1P48048 391 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 TAF10Q12962 218 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PNKPQ96T60 521 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 MDM4O15151 490 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 CXCL14O95715 111 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 KDELR1P24390 212 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 CDH6P55285 790 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PLPP4Q5VZY2 271 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 SPOCD1Q6ZMY3 1216 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 ZNF572Q7Z3I7 529 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PRELID2Q8N945 189 aa16.59■□□□□ 0.25
CBWD3-216ENST00000621396 PHOSPHO2Q8TCD6 241 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms