RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 NMUR1Q9HB89 426 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
CPNE3-210ENST00000621245 CFAP45Q9UL16 551 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 PDXKO00764 312 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 CYP26A1O43174 497 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 GREM1O60565 184 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 RTN3O95197 1032 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-210ENST00000621245 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-210ENST00000621245 ZNF806P0C7X5 589 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 ADH5P11766 374 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
CPNE3-210ENST00000621245 PFKLP17858 780 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 KIR2DL1P43626 348 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-210ENST00000621245 PDE6CP51160 858 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 CLEC20AQ6ZU45 233 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 TMEM25Q86YD3 366 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 MIB1Q86YT6 1006 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 IL17RCQ8NAC3 791 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
CPNE3-210ENST00000621245 TSTD1Q8NFU3 115 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 ACDQ96AP0 544 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 CHD6Q8TD26 2715 aa12.11□□□□□ -0.47
CPNE3-210ENST00000621245 PCDH15Q96QU1 1955 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 DMXL2Q8TDJ6 3036 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 TM4SF5O14894 197 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 KAT7O95251 611 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 ADRB1P08588 477 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 CD58P19256 250 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 SDHBP21912 280 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 NR2F2P24468 414 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 SYKP43405 635 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 PPP3CCP48454 512 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 VAMP7P51809 220 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 NR1H3Q13133 447 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 ZCWPW2Q504Y3 356 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 HECTD3Q5T447 861 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 SNX30Q5VWJ9 437 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 ETFBKMTQ8IXQ9 262 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 CRYBG2Q8N1P7 616 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 PDZD8Q8NEN9 1154 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 LOXL4Q96JB6 756 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 CSNK1G1Q9HCP0 422 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 TRAF3IP3Q9Y228 551 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-210ENST00000621245 ATP8B3O60423 1300 aa12.1□□□□□ -0.47
CPNE3-210ENST00000621245 IGF2RP11717 2491 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 TLR5O60602 858 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 TULP3O75386 442 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 ADH1CP00326 375 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 GBP1P32455 592 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 AP3M2P53677 418 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 KRT85P78386 507 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 CREB5Q02930 508 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 CRY1Q16526 586 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 STPG1Q5TH74 334 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 PMS2CLQ68D20 193 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 KRBA2Q6ZNG9 492 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 FAM186BQ8IYM0 893 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 C12orf50Q8NA57 414 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-210ENST00000621245 OLIG1Q8TAK6 271 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 OVCA2Q8WZ82 227 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 TNIP3Q96KP6 325 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 PNKPQ96T60 521 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-210ENST00000621245 CD93Q9NPY3 652 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
CPNE3-210ENST00000621245 MBD1Q9UIS9 605 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-210ENST00000621245 NBEAQ8NFP9 2946 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 CELSR3Q9NYQ7 3312 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 CKAP5Q14008 2032 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 A0A1W2PQH9 124 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 E2F8A0AVK6 867 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
CPNE3-210ENST00000621245 HOXC11O43248 304 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-210ENST00000621245 CALUO43852 315 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-210ENST00000621245 FAM200BP0CF97 657 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 WASP42768 502 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 TUBP50607 506 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 LIMK1P53667 647 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 ARMCX6Q7L4S7 300 aa12.08□□□□□ -0.48
CPNE3-210ENST00000621245 SCD5Q86SK9 330 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms