RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
CBWD1-228ENST00000619157 GBP3Q9H0R5 595 aa8.18□□□□□ -1.1
CBWD1-228ENST00000619157 PRMT7Q9NVM4 692 aaPredicted RBP8.18□□□□□ -1.1
CBWD1-228ENST00000619157 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
CBWD1-228ENST00000619157 COG5Q9UP83 839 aa8.18□□□□□ -1.1
CBWD1-228ENST00000619157 SLC16A4O15374 487 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 SLPIP03973 132 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PLS3P13797 630 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 IL9P15248 144 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 TACR2P21452 398 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PROZP22891 400 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 UBA7P41226 1012 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 NRIP1P48552 1158 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ZNF131P52739 623 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 UBE3AQ05086 875 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ADAM15Q13444 863 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PRPF4BQ13523 1007 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 GIT2Q14161 759 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 DHX8Q14562 1220 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 MAPK6Q16659 721 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PLPP4Q5VZY2 271 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 TAS1R1Q7RTX1 841 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 GPBP1Q86WP2 473 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 CPNE8Q86YQ8 564 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ZBTB8OSQ8IWT0 167 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 NETO2Q8NC67 525 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 RABGGTAQ92696 567 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PGBD4Q96DM1 585 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 IGSF21Q96ID5 467 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ZBTB45Q96K62 511 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 MSLNLQ96KJ4 702 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ACO2Q99798 780 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 TARS2Q9BW92 718 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 MRPL9Q9BYD2 267 aaKnown RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ZBP1Q9H171 429 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 C2orf40Q9H1Z8 148 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 CDT1Q9H211 546 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 IKZF4Q9H2S9 585 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 ZSCAN16Q9H4T2 348 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-228ENST00000619157 TLR9Q9NR96 1032 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 SPG21Q9NZD8 308 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 LZTS1Q9Y250 596 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 PHLPP2Q6ZVD8 1323 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 TRIOO75962 3097 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 MYH15Q9Y2K3 1946 aa8.17□□□□□ -1.1
CBWD1-228ENST00000619157 C2orf71A6NGG8 1288 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CCDC169A6NNP5 214 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 NRP1O14786 923 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 SLC26A4O43511 780 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 RECQL4O94761 1208 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 PPM1AP35813 382 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 SLC9A5Q14940 896 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 PPP2R5AQ15172 486 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CLUL1Q15846 466 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 DUSP6Q16828 381 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 DPY19L1Q2PZI1 675 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 LEXMQ3ZCV2 418 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 ATF7IP2Q5U623 682 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 SLC39A4Q6P5W5 647 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 SHC4Q6S5L8 630 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 STK32CQ86UX6 486 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 Q8N1X5 172 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 EFHBQ8N7U6 833 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CNNM3Q8NE01 707 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 LARP4BQ92615 738 aaKnown RBP8.16□□□□□ -1.1
CBWD1-228ENST00000619157 DNAJC19Q96DA6 116 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CALML4Q96GE6 196 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 IFT74Q96LB3 600 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 DRC1Q96MC2 740 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 TCF25Q9BQ70 676 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 FGFBP2Q9BYJ0 223 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 KMT5AQ9NQR1 393 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CLDND1Q9NY35 253 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 BARX2Q9UMQ3 279 aaPredicted RBP8.16□□□□□ -1.1
CBWD1-228ENST00000619157 TNFSF13BQ9Y275 285 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 GIT1Q9Y2X7 761 aa8.16□□□□□ -1.1
CBWD1-228ENST00000619157 TCF20Q9UGU0 1960 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 MYMKA6NI61 221 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 TISP43B9A030 160 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 K7ERI5 159 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 CBFA2T2O43439 604 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 FAM189A1O60320 539 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 THBS2P35442 1172 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 DDIT3P35638 169 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 GDF5P43026 501 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 EFNA5P52803 228 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 RNASELQ05823 741 aaKnown RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 DMP1Q13316 513 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-228ENST00000619157 PTPN14Q15678 1187 aa8.15□□□□□ -1.1
CBWD1-228ENST00000619157 XKR4Q5GH76 650 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms