RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 MGAT5Q09328 741 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 HABP4Q5JVS0 413 aaKnown RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 CELF3Q5SZQ8 465 aaKnown RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 EEF1DP3Q658K8 133 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 RNF43Q68DV7 783 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 KCNT2Q6UVM3 1135 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 MON1BQ7L1V2 547 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SCUBE1Q8IWY4 988 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 C12orf50Q8NA57 414 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 APOL2Q9BQE5 337 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 ILKAPQ9H0C8 392 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 CATSPERBQ9H7T0 1116 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 GRIN2DO15399 1336 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 MYPNQ86TC9 1320 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 NUP98P52948 1817 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 ALOX15BO15296 676 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 PIAS1O75925 651 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 UNC5CO95185 931 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 AMPD1P23109 780 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SERPINB8P50452 374 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 C16orf89Q6UX73 402 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 NPNTQ6UXI9 565 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 LINC00523Q86TU6 105 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 PRCCQ92733 491 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-210ENST00000618939 COPS5Q92905 334 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 CEP41Q9BYV8 373 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 SLCO1B3Q9NPD5 702 aa14.36□□□□□ -0.11
CNOT3-210ENST00000618939 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 GSTA4O15217 222 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 TIMM44O43615 452 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 RALBP11234 206 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 GRK2P25098 689 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CRYMQ14894 314 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CNGA3Q16281 694 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 NBPF20Q3BBV1 942 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ZC3H3Q8IXZ2 948 aaKnown RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 HTR3CQ8WXA8 447 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 TSPAN17Q96FV3 270 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ANLNQ9NQW6 1124 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 TAGLN3Q9UI15 199 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 SUFUQ9UMX1 484 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CDYLQ9Y232 598 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 C15orf41Q9Y2V0 281 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 F9P00740 461 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 APOA4P06727 396 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ACADSP16219 412 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 SLC45A4Q5BKX6 768 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 SETD3Q86TU7 594 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 DDIASQ8IXT1 998 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 OPTNQ96CV9 577 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ACSS3Q9H6R3 686 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 ARHGAP26Q9UNA1 814 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 MYH7P12883 1935 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 PMPCBO75439 489 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CPB1P15086 417 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 PPARGP37231 505 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 PEX5P50542 639 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 MFSD14CQ5VZR4 134 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 SLC27A1Q6PCB7 646 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 STRA8Q7Z7C7 330 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 CATSPER1Q8NEC5 780 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 MRPL1Q9BYD6 325 aaKnown RBP14.35□□□□□ -0.11
CNOT3-210ENST00000618939 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 MROH7Q68CQ1 1323 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 RPTORQ8N122 1335 aa14.35□□□□□ -0.11
CNOT3-210ENST00000618939 RNF103-CHMP3A0A140T963 221 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 DDNO94850 711 aaPredicted RBP14.34□□□□□ -0.11
CNOT3-210ENST00000618939 GFAPP14136 432 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 JAG1P78504 1218 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 LRRC8EQ6NSJ5 796 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 LRRC39Q96DD0 335 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 SGF29Q96ES7 293 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 SPON1Q9HCB6 807 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 SARS2Q9NP81 518 aaKnown RBP14.34□□□□□ -0.11
CNOT3-210ENST00000618939 XPNPEP1Q9NQW7 623 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 ZMYM2Q9UBW7 1377 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 B4GALT5O43286 388 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 ANXA9O76027 345 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 TRUB2O95900 331 aaKnown RBP14.34□□□□□ -0.11
CNOT3-210ENST00000618939 LGALS2P05162 132 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 CPA3P15088 417 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
CNOT3-210ENST00000618939 NR2C2P49116 596 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 DCAF12L1Q5VU92 463 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 JOSD2Q8TAC2 188 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 CALML6Q8TD86 181 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 OXNAD1Q96HP4 312 aaPredicted RBP14.34□□□□□ -0.11
CNOT3-210ENST00000618939 PPP1R2P1Q96PQ5 205 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 BTBD10Q9BSF8 475 aa14.34□□□□□ -0.11
CNOT3-210ENST00000618939 KIF9Q9HAQ2 790 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms