RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 DCAF6Q58WW2 860 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 INPP4BO15327 924 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 ANXA6P08133 673 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 AKAP14Q86UN6 197 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 OXNAD1Q96HP4 312 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CAMK2GQ13555 558 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 PDIA5Q14554 519 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 RIBC2Q9H4K1 309 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 TRAPPC3O43617 180 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 GPC1P35052 558 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 FAM81AQ8TBF8 368 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 SGF29Q96ES7 293 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 MMP19Q99542 508 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 MMADHCQ9H3L0 296 aaPredicted RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CPSF1Q10570 1443 aaKnown RBP11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CPDO75976 1380 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CBFA2T3O75081 653 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CDH3P22223 829 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 SLC1A6P48664 564 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 FBXO42Q6P3S6 717 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 ZNF605Q86T29 641 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 OR7A2PQ8NGA2 310 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
PCDHA4-204ENST00000618834 CST8O60676 142 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 KATNA1O75449 491 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 LDLRP01130 860 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 GHRP10912 638 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 CCNA2P20248 432 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 GSSP48637 474 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 CASP5P51878 434 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 EXOC3L1Q86VI1 746 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 USP13Q92995 863 aaPredicted RBP11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 TCF7L2Q9NQB0 619 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 RAD54BQ9Y620 910 aa11.83□□□□□ -0.51
PCDHA4-204ENST00000618834 PYDC2Q56P42 97 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 PAFAH2Q99487 392 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 DOLKQ9UPQ8 538 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 KCNA6P17658 529 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 BGNP21810 368 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 HPCAL1P37235 193 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 STRA8Q7Z7C7 330 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CCDC185Q8N715 623 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 GORASP1Q9BQQ3 440 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 PRKCBP05771 671 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 ATG14Q6ZNE5 492 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 RIPOR1Q6ZS17 1223 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 TC2NQ8N9U0 490 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 UBE2QL1A1L167 161 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 QPRTQ15274 297 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 OTUD3Q5T2D3 398 aaPredicted RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 IRGCQ6NXR0 463 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 ZCCHC8Q6NZY4 707 aaKnown RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 TMEM8AQ9HCN3 771 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 VPS4BO75351 444 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 HPGDP15428 266 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 MB21D2Q8IYB1 491 aaPredicted RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 EURLQ9NYK6 297 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 COQ6Q9Y2Z9 468 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CHD4Q14839 1912 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 KCNJ1P48048 391 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 GLRBP48167 497 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 S100ZQ8WXG8 99 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 NT5C1AQ9BXI3 368 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CRNNQ9UBG3 495 aaPredicted RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 FGFR3P22607 806 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 IL6STP40189 918 aaPredicted RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 HPS3Q969F9 1004 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 NUAK2Q9H093 628 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 COPS7BQ9H9Q2 264 aaPredicted RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 ANKRD6Q9Y2G4 727 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 PTGES3LE9PB15 166 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CD3EAPO15446 510 aaKnown RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 P4HA2O15460 535 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 TMEM253P0C7T8 217 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 TKTP29401 623 aaKnown RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 GPR1P46091 355 aa11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 PSMD4P55036 377 aaKnown RBP11.83□□□□□ -0.52
PCDHA4-204ENST00000618834 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms