RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 FBXO27Q8NI29 283 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SHKBP1Q8TBC3 707 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LRRC8CQ8TDW0 803 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PYROXD1Q8WU10 500 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SEPT1Q8WYJ6 367 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 GRAMD1AQ96CP6 724 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PTCD3Q96EY7 689 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LRRC37BQ96QE4 947 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TACO1Q9BSH4 297 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PHACTR1Q9C0D0 580 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SPATC1LQ9H0A9 340 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 RNPEPQ9H4A4 650 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 DENND2DQ9H6A0 471 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TLE6Q9H808 572 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF395Q9H8N7 513 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 POPDC2Q9HBU9 364 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SSU72Q9NP77 194 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PRDM9Q9NQV7 894 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ARL8BQ9NVJ2 186 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 HOXC10Q9NYD6 342 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FETUBQ9UGM5 382 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 DCTN4Q9UJW0 460 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 USP18Q9UMW8 372 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 AGTPBP1Q9UPW5 1226 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 EFR3BQ9Y2G0 817 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MFHAS1Q9Y4C4 1052 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NR2E3Q9Y5X4 410 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PLXNA1Q9UIW2 1896 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SCN1AP35498 2009 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C2CD4BA6NLJ0 364 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 INO80B-WBP1J3KQ70 363 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 M0QYV0 167 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ACKR2O00590 384 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C2CD2LO14523 706 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TRAFD1O14545 582 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SKAP2O75563 359 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 UPP2O95045 317 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 STAG3L1P0CL83 205 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TPBGLP0DKB5 382 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 BMP1P13497 986 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 BGNP21810 368 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CCND1P24385 295 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CCNG1P51959 295 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ATXN1P54253 815 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ARL4CP56559 192 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 BASP1P80723 227 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MRPS5P82675 430 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SLC18A2Q05940 514 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TRPC3Q13507 836 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PRKD1Q15139 912 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PARP6Q2NL67 630 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SLC10A6Q3KNW5 377 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ANKRD20A2Q5SQ80 823 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CELF3Q5SZQ8 465 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FAM102AQ5T9C2 384 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ANKRD20A1Q5TYW2 823 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 HHATQ5VTY9 493 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ANKRD20A3Q5VUR7 823 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PPP1R2P3Q6NXS1 205 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 DSTYKQ6XUX3 929 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ATG14Q6ZNE5 492 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 BZW1Q7L1Q6 419 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CAND1Q86VP6 1230 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NCAPG2Q86XI2 1143 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 VSIG1Q86XK7 387 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 RFX6Q8HWS3 928 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MPP5Q8N3R9 675 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC33Q8N5R6 958 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C7orf31Q8N865 590 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MAB21L3Q8N8X9 362 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PCDH19Q8TAB3 1148 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SPATA18Q8TC71 538 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SLC44A1Q8WWI5 657 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SKA1Q96BD8 255 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CPB2Q96IY4 423 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CLMNQ96JQ2 1002 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FAM111AQ96PZ2 611 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LBHD1Q9BQE6 289 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PLCD4Q9BRC7 762 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MECRQ9BV79 373 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CALN1Q9BXU9 219 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CADM1Q9BY67 442 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 INO80BQ9C086 356 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C20orf27Q9GZN8 174 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PDZD7Q9H5P4 517 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NRBP2Q9NSY0 501 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NOP53Q9NZM5 478 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SENP1Q9P0U3 644 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 SLC17A6Q9P2U8 582 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 BPTFQ12830 3046 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 DNAH12Q6ZR08 3092 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 DNAJC25-GNG10A0A024R161 153 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CYB561D2O14569 222 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 IRF6O14896 467 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 RFPL1O75677 317 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ZWINTO95229 277 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms