RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 TRPV5Q9NQA5 729 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 POLE4Q9NR33 117 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 STK17AQ9UEE5 414 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 A0A088AWK7 358 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 BTBD19C9JJ37 291 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 DDAH1O94760 285 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 NR3C1P04150 777 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 ZNF182P17025 639 aaPredicted RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 HSD17B7P56937 341 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 GRM2Q14416 872 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 SMU1Q2TAY7 513 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 RBM20Q5T481 1227 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 HSPH1Q92598 858 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.383e-12■□□□□ 8.4
MATR3-227ENST00000618441 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 MARF1Q9Y4F3 1742 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 CALUO43852 315 aaPredicted RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 RNASEH2AO75792 299 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 ZNF12P17014 697 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 STAT3P40763 770 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 CDKL1Q00532 357 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 COL19A1Q14993 1142 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 FGD3Q5JSP0 725 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 E2F7Q96AV8 911 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 EIF2AK1Q9BQI3 630 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 BCAS3Q9H6U6 928 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 DGKBQ9Y6T7 804 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 TOR1BO14657 336 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 PRPF4O43172 522 aaKnown RBP eCLIP12.69□□□□□ -0.381e-12■■■□□ 17.9
MATR3-227ENST00000618441 SLC37A4O43826 429 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 TSPAN9O75954 239 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 DLDP09622 509 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 BMP3P12645 472 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 KRT5P13647 590 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 IFNA8P32881 189 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 CLK1P49759 484 aaKnown RBP12.69□□□□□ -0.38
MATR3-227ENST00000618441 NDST2P52849 883 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 NEPROQ6NW34 567 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 ELMSAN1Q6PJG2 1045 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 NELL1Q92832 810 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 OMA1Q96E52 524 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 PIF1Q9H611 641 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 FANCFQ9NPI8 374 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 CDH22Q9UJ99 828 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 MYRFQ9Y2G1 1151 aa12.69□□□□□ -0.38
MATR3-227ENST00000618441 FYNP06241 537 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 P4HA1P13674 534 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 NUDT2P50583 147 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 TTC33Q6PID6 262 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 TMEM26Q6ZUK4 368 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 NOP9Q86U38 636 aaKnown RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 NAT16Q8N8M0 369 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 EPS15L1Q9UBC2 864 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 PCDHA12Q9UN75 941 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 AQP9O43315 295 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 EML3Q32P44 896 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 C11orf63Q6NUN7 778 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 NIPAL1Q6NVV3 410 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 NLGN1Q8N2Q7 840 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 FAM156AQ8NDB6 213 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 HTRA1Q92743 480 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 KCNK13Q9HB14 408 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 TPST1O60507 370 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 LYPLA1O75608 230 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 PDE8BO95263 885 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 GGPS1O95749 300 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 GRK2P25098 689 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 CAV1Q03135 178 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 UBE2UQ5VVX9 321 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 SLC15A4Q8N697 577 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
MATR3-227ENST00000618441 GCOM2Q9BZD3 368 aaPredicted RBP12.68□□□□□ -0.38
MATR3-227ENST00000618441 EPB41L1Q9H4G0 881 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms