RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 HOXC11O43248 304 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-228ENST00000617771 RETP07949 1114 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 CD19P15391 556 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 PLA2G4AP47712 749 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 BCAT1P54687 386 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 STX17P56962 302 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 MRPS21P82921 87 aaKnown RBP26.52■■□□□ 1.84
VEGFA-228ENST00000617771 GOLGA7BQ2TAP0 167 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 C2orf27AQ580R0 203 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 PIGZQ86VD9 579 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 C12orf40Q86WS4 652 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 ARHGAP18Q8N392 663 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 GAB3Q8WWW8 586 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 WBP2Q969T9 261 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 ARHGEF4Q9NR80 690 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 POLR3BQ9NW08 1133 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-228ENST00000617771 TSPAN16Q9UKR8 245 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 KIAA1257Q9ULG3 409 aa26.52■■□□□ 1.84
VEGFA-228ENST00000617771 RPP40O75818 363 aaKnown RBP26.51■■□□□ 1.83
VEGFA-228ENST00000617771 KAT7O95251 611 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 FGFR1OPO95684 399 aaKnown RBP26.51■■□□□ 1.83
VEGFA-228ENST00000617771 APBB3O95704 486 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 GRIA2P42262 883 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 ANO4Q32M45 955 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 RAB41Q5JT25 222 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 SCD5Q86SK9 330 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 TTC30AQ86WT1 665 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 NUDT5Q9UKK9 219 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 USP18Q9UMW8 372 aa26.51■■□□□ 1.83
VEGFA-228ENST00000617771 OTOGLQ3ZCN5 2332 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 AXIN1O15169 862 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 GREM1O60565 184 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 CCDC192P0DO97 292 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 VDRP11473 427 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 KDSRQ06136 332 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 PPM1KQ8N3J5 372 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 UBR7Q8N806 425 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 KIAA1468Q9P260 1216 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 GVINP1Q7Z2Y8 2422 aa26.5■■□□□ 1.83
VEGFA-228ENST00000617771 A0A0A0MRY4 1105 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 XPO1O14980 1071 aaKnown RBP26.49■■□□□ 1.83
VEGFA-228ENST00000617771 MDM4O15151 490 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 LRP3O75074 770 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 TNFRSF4P43489 277 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 MARSP56192 900 aaKnown RBP26.49■■□□□ 1.83
VEGFA-228ENST00000617771 BST2Q10589 180 aaKnown RBP26.49■■□□□ 1.83
VEGFA-228ENST00000617771 HSF5Q4G112 596 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-228ENST00000617771 NUDT18Q6ZVK8 323 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 CACNA2D4Q7Z3S7 1137 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 TMEM25Q86YD3 366 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 TRIM59Q8IWR1 403 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 NAT16Q8N8M0 369 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 TSTD1Q8NFU3 115 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 SRRTQ9BXP5 876 aaKnown RBP26.49■■□□□ 1.83
VEGFA-228ENST00000617771 DEC1Q9P2X7 70 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 EBF1Q9UH73 591 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 MMP17Q9ULZ9 603 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 PCDHB4Q9Y5E5 795 aa26.49■■□□□ 1.83
VEGFA-228ENST00000617771 PAEPP09466 180 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 TKTL1P51854 596 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 PDE4CQ08493 712 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 KCNH2Q12809 1159 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 CAMK4Q16566 473 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 TMEM270Q6UE05 265 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 MIB1Q86YT6 1006 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 ETFBKMTQ8IXQ9 262 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 FAM160A2Q8N612 972 aaPredicted RBP26.48■■□□□ 1.83
VEGFA-228ENST00000617771 LRRC4Q9HBW1 653 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.48■■□□□ 1.831e-11■□□□□ 9.4
VEGFA-228ENST00000617771 KIAA1549LQ6ZVL6 1849 aa26.48■■□□□ 1.83
VEGFA-228ENST00000617771 EP300Q09472 2414 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-228ENST00000617771 TULP3O75386 442 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 ZBED1O96006 694 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 AFPP02771 609 aaKnown RBP26.47■■□□□ 1.83
VEGFA-228ENST00000617771 SETSIPP0DME0 302 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 COG7P83436 770 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 LMNB2Q03252 620 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 SPEM2Q0P670 501 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 MESP2Q0VG99 397 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 RSRC2Q7L4I2 434 aaKnown RBP26.47■■□□□ 1.83
VEGFA-228ENST00000617771 PHTF2Q8N3S3 785 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 LMO3Q8TAP4 145 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 RMDN1Q96DB5 314 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 XPO6Q96QU8 1125 aaKnown RBP26.47■■□□□ 1.83
VEGFA-228ENST00000617771 WDR35Q9P2L0 1181 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 RASAL2Q9UJF2 1139 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 ZNF510Q9Y2H8 683 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 FRYLO94915 3013 aa26.47■■□□□ 1.83
VEGFA-228ENST00000617771 TBC1D3BA6NDS4 549 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 O00370 1275 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 TGM1P22735 817 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 TIE1P35590 1138 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 YWHAGP61981 247 aaKnown RBP eCLIP26.46■■□□□ 1.83
VEGFA-228ENST00000617771 EFEMP1Q12805 493 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 PM20D1Q6GTS8 502 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 CCDC33Q8N5R6 958 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 EHBP1Q8NDI1 1231 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 BBS2Q9BXC9 721 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 ULBP1Q9BZM6 244 aa26.46■■□□□ 1.83
VEGFA-228ENST00000617771 PARD6AQ9NPB6 346 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms